jar

com.github.phenomics : ontolib-core

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Sep 05, 2017
1 usages
9 stars

ontolib-core contains the core functionality for representing ontologies

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com.github.phenomics.ontolib.ser

├─ com.github.phenomics.ontolib.ser.DataSerializer.class - [JAR]

├─ com.github.phenomics.ontolib.ser.SerializationException.class - [JAR]

├─ com.github.phenomics.ontolib.ser.SerializationRuntimeException.class - [JAR]

├─ com.github.phenomics.ontolib.ser.VersionComparator.class - [JAR]

├─ com.github.phenomics.ontolib.ser.VersionTokenizer.class - [JAR]

com.github.phenomics.ontolib.ontology.scoredist

├─ com.github.phenomics.ontolib.ontology.scoredist.CannotMergeScoreDistributions.class - [JAR]

├─ com.github.phenomics.ontolib.ontology.scoredist.ObjectScoreDistribution.class - [JAR]

├─ com.github.phenomics.ontolib.ontology.scoredist.ScoreDistribution.class - [JAR]

├─ com.github.phenomics.ontolib.ontology.scoredist.ScoreDistributions.class - [JAR]

├─ com.github.phenomics.ontolib.ontology.scoredist.ScoreSamplingOptions.class - [JAR]

├─ com.github.phenomics.ontolib.ontology.scoredist.SimilarityScoreSampling.class - [JAR]

com.github.phenomics.ontolib.formats.mpo

├─ com.github.phenomics.ontolib.formats.mpo.MpoOntology.class - [JAR]

├─ com.github.phenomics.ontolib.formats.mpo.MpoRelationQualifier.class - [JAR]

├─ com.github.phenomics.ontolib.formats.mpo.MpoTerm.class - [JAR]

├─ com.github.phenomics.ontolib.formats.mpo.MpoTermRelation.class - [JAR]

com.github.phenomics.ontolib.formats.upheno

├─ com.github.phenomics.ontolib.formats.upheno.UphenoOntology.class - [JAR]

├─ com.github.phenomics.ontolib.formats.upheno.UphenoRelationQualifier.class - [JAR]

├─ com.github.phenomics.ontolib.formats.upheno.UphenoTerm.class - [JAR]

├─ com.github.phenomics.ontolib.formats.upheno.UphenoTermRelation.class - [JAR]

com.github.phenomics.ontolib.formats.go

├─ com.github.phenomics.ontolib.formats.go.GoGaf21Annotation.class - [JAR]

├─ com.github.phenomics.ontolib.formats.go.GoOntology.class - [JAR]

├─ com.github.phenomics.ontolib.formats.go.GoRelationQualifier.class - [JAR]

├─ com.github.phenomics.ontolib.formats.go.GoTerm.class - [JAR]

├─ com.github.phenomics.ontolib.formats.go.GoTermRelation.class - [JAR]

com.github.phenomics.ontolib.formats.hpo

├─ com.github.phenomics.ontolib.formats.hpo.HpoDisease.class - [JAR]

├─ com.github.phenomics.ontolib.formats.hpo.HpoDiseaseAnnotation.class - [JAR]

├─ com.github.phenomics.ontolib.formats.hpo.HpoFrequency.class - [JAR]

├─ com.github.phenomics.ontolib.formats.hpo.HpoFrequencyTermIds.class - [JAR]

├─ com.github.phenomics.ontolib.formats.hpo.HpoGeneAnnotation.class - [JAR]

├─ com.github.phenomics.ontolib.formats.hpo.HpoModeOfInheritanceTermIds.class - [JAR]

├─ com.github.phenomics.ontolib.formats.hpo.HpoOntology.class - [JAR]

├─ com.github.phenomics.ontolib.formats.hpo.HpoRelationQualifier.class - [JAR]

├─ com.github.phenomics.ontolib.formats.hpo.HpoSubOntologyRootTermIds.class - [JAR]

├─ com.github.phenomics.ontolib.formats.hpo.HpoTerm.class - [JAR]

├─ com.github.phenomics.ontolib.formats.hpo.HpoTermRelation.class - [JAR]

com.github.phenomics.ontolib.utils

├─ com.github.phenomics.ontolib.utils.MersenneTwister.class - [JAR]

├─ com.github.phenomics.ontolib.utils.ProgressReporter.class - [JAR]

com.github.phenomics.ontolib.graph.data

├─ com.github.phenomics.ontolib.graph.data.DirectedGraph.class - [JAR]

├─ com.github.phenomics.ontolib.graph.data.Edge.class - [JAR]

├─ com.github.phenomics.ontolib.graph.data.GraphConstructionException.class - [JAR]

├─ com.github.phenomics.ontolib.graph.data.GraphNotSimpleException.class - [JAR]

├─ com.github.phenomics.ontolib.graph.data.ImmutableDirectedGraph.class - [JAR]

├─ com.github.phenomics.ontolib.graph.data.ImmutableEdge.class - [JAR]

├─ com.github.phenomics.ontolib.graph.data.ImmutableVertexEdgeList.class - [JAR]

├─ com.github.phenomics.ontolib.graph.data.VerticesAndEdgesIncompatibleException.class - [JAR]

com.github.phenomics.ontolib.ontology.data

├─ com.github.phenomics.ontolib.ontology.data.Dbxref.class - [JAR]

├─ com.github.phenomics.ontolib.ontology.data.ImmutableDbxref.class - [JAR]

├─ com.github.phenomics.ontolib.ontology.data.ImmutableOntology.class - [JAR]

├─ com.github.phenomics.ontolib.ontology.data.ImmutableTermId.class - [JAR]

├─ com.github.phenomics.ontolib.ontology.data.ImmutableTermPrefix.class - [JAR]

├─ com.github.phenomics.ontolib.ontology.data.ImmutableTermSynonym.class - [JAR]

├─ com.github.phenomics.ontolib.ontology.data.ImmutableTermXref.class - [JAR]

├─ com.github.phenomics.ontolib.ontology.data.MinimalOntology.class - [JAR]

├─ com.github.phenomics.ontolib.ontology.data.Ontology.class - [JAR]

├─ com.github.phenomics.ontolib.ontology.data.Term.class - [JAR]

├─ com.github.phenomics.ontolib.ontology.data.TermAnnotation.class - [JAR]

├─ com.github.phenomics.ontolib.ontology.data.TermAnnotations.class - [JAR]

├─ com.github.phenomics.ontolib.ontology.data.TermId.class - [JAR]

├─ com.github.phenomics.ontolib.ontology.data.TermIds.class - [JAR]

├─ com.github.phenomics.ontolib.ontology.data.TermPrefix.class - [JAR]

├─ com.github.phenomics.ontolib.ontology.data.TermRelation.class - [JAR]

├─ com.github.phenomics.ontolib.ontology.data.TermSynonym.class - [JAR]

├─ com.github.phenomics.ontolib.ontology.data.TermSynonymScope.class - [JAR]

├─ com.github.phenomics.ontolib.ontology.data.TermVisitor.class - [JAR]

├─ com.github.phenomics.ontolib.ontology.data.TermXref.class - [JAR]

com.github.phenomics.ontolib.graph.algo

├─ com.github.phenomics.ontolib.graph.algo.AbstractGraphVertexStartFromVertexTraversal.class - [JAR]

├─ com.github.phenomics.ontolib.graph.algo.BreadthFirstSearch.class - [JAR]

├─ com.github.phenomics.ontolib.graph.algo.DepthFirstSearch.class - [JAR]

├─ com.github.phenomics.ontolib.graph.algo.ForwardNeighborSelector.class - [JAR]

├─ com.github.phenomics.ontolib.graph.algo.GraphNotDagException.class - [JAR]

├─ com.github.phenomics.ontolib.graph.algo.GraphVertexAllIteration.class - [JAR]

├─ com.github.phenomics.ontolib.graph.algo.NeighborSelector.class - [JAR]

├─ com.github.phenomics.ontolib.graph.algo.ReverseNeighborSelector.class - [JAR]

├─ com.github.phenomics.ontolib.graph.algo.TopologicalSorting.class - [JAR]

├─ com.github.phenomics.ontolib.graph.algo.VertexVisitor.class - [JAR]

com.github.phenomics.ontolib.base

├─ com.github.phenomics.ontolib.base.OntoLibException.class - [JAR]

├─ com.github.phenomics.ontolib.base.OntoLibRuntimeException.class - [JAR]

com.github.phenomics.ontolib.formats.uberpheno

├─ com.github.phenomics.ontolib.formats.uberpheno.UberphenoGeneAnnotation.class - [JAR]

├─ com.github.phenomics.ontolib.formats.uberpheno.UberphenoOntology.class - [JAR]

├─ com.github.phenomics.ontolib.formats.uberpheno.UberphenoRelationQualifier.class - [JAR]

├─ com.github.phenomics.ontolib.formats.uberpheno.UberphenoTerm.class - [JAR]

├─ com.github.phenomics.ontolib.formats.uberpheno.UberphenoTermRelation.class - [JAR]

com.github.phenomics.ontolib.ontology.similarity

├─ com.github.phenomics.ontolib.ontology.similarity.AbstractCommonAncestorSimilarity.class - [JAR]

├─ com.github.phenomics.ontolib.ontology.similarity.CosineSimilarity.class - [JAR]

├─ com.github.phenomics.ontolib.ontology.similarity.JaccardSimilarity.class - [JAR]

├─ com.github.phenomics.ontolib.ontology.similarity.PairwiseResnikSimilarity.class - [JAR]

├─ com.github.phenomics.ontolib.ontology.similarity.PairwiseSimilarity.class - [JAR]

├─ com.github.phenomics.ontolib.ontology.similarity.PrecomputingPairwiseResnikSimilarity.class - [JAR]

├─ com.github.phenomics.ontolib.ontology.similarity.ResnikSimilarity.class - [JAR]

├─ com.github.phenomics.ontolib.ontology.similarity.Similarity.class - [JAR]

├─ com.github.phenomics.ontolib.ontology.similarity.SimpleFeatureVectorSimilarity.class - [JAR]

├─ com.github.phenomics.ontolib.ontology.similarity.TermOverlapSimilarity.class - [JAR]

com.github.phenomics.ontolib.ontology.algo

├─ com.github.phenomics.ontolib.ontology.algo.InformationContentComputation.class - [JAR]

├─ com.github.phenomics.ontolib.ontology.algo.OntologyTerms.class - [JAR]

├─ com.github.phenomics.ontolib.ontology.algo.ShortestPathTable.class - [JAR]