View Java Class Source Code in JAR file
- Download JD-GUI to open JAR file and explore Java source code file (.class .java)
- Click menu "File → Open File..." or just drag-and-drop the JAR file in the JD-GUI window jannovar-core-0.41.jar file.
Once you open a JAR file, all the java classes in the JAR file will be displayed.
de.charite.compbio.jannovar.annotation.builders
├─ de.charite.compbio.jannovar.annotation.builders.AnnotationBuilder.class - [JAR]
├─ de.charite.compbio.jannovar.annotation.builders.AnnotationBuilderDispatcher.class - [JAR]
├─ de.charite.compbio.jannovar.annotation.builders.AnnotationBuilderOptions.class - [JAR]
├─ de.charite.compbio.jannovar.annotation.builders.BlockSubstitutionAnnotationBuilder.class - [JAR]
├─ de.charite.compbio.jannovar.annotation.builders.DeletionAnnotationBuilder.class - [JAR]
├─ de.charite.compbio.jannovar.annotation.builders.GenomicNucleotideChangeBuilder.class - [JAR]
├─ de.charite.compbio.jannovar.annotation.builders.InsertionAnnotationBuilder.class - [JAR]
├─ de.charite.compbio.jannovar.annotation.builders.SNVAnnotationBuilder.class - [JAR]
├─ de.charite.compbio.jannovar.annotation.builders.SVAnnotationBuilder.class - [JAR]
├─ de.charite.compbio.jannovar.annotation.builders.SVAnnotationBuilderDispatcher.class - [JAR]
├─ de.charite.compbio.jannovar.annotation.builders.SVBreakendAnnotationBuilder.class - [JAR]
├─ de.charite.compbio.jannovar.annotation.builders.SVCopyNumberVariantAnnotationBuilder.class - [JAR]
├─ de.charite.compbio.jannovar.annotation.builders.SVDeletionAnnotationBuilder.class - [JAR]
├─ de.charite.compbio.jannovar.annotation.builders.SVDuplicationAnnotationBuilder.class - [JAR]
├─ de.charite.compbio.jannovar.annotation.builders.SVInsertionAnnotationBuilder.class - [JAR]
├─ de.charite.compbio.jannovar.annotation.builders.SVInversionAnnotationBuilder.class - [JAR]
├─ de.charite.compbio.jannovar.annotation.builders.SVMobileElementDeletionAnnotationBuilder.class - [JAR]
├─ de.charite.compbio.jannovar.annotation.builders.SVMobileElementInsertionAnnotationBuilder.class - [JAR]
├─ de.charite.compbio.jannovar.annotation.builders.SVTandemDuplicationAnnotationBuilder.class - [JAR]
├─ de.charite.compbio.jannovar.annotation.builders.StructuralVariantAnnotationBuilder.class - [JAR]
de.charite.compbio.jannovar.hgnc
├─ de.charite.compbio.jannovar.hgnc.AltGeneIDType.class - [JAR]
├─ de.charite.compbio.jannovar.hgnc.HGNCParser.class - [JAR]
├─ de.charite.compbio.jannovar.hgnc.HGNCRecord.class - [JAR]
de.charite.compbio.jannovar.mendel
├─ de.charite.compbio.jannovar.mendel.ChromosomeType.class - [JAR]
├─ de.charite.compbio.jannovar.mendel.Genotype.class - [JAR]
├─ de.charite.compbio.jannovar.mendel.GenotypeBuilder.class - [JAR]
├─ de.charite.compbio.jannovar.mendel.GenotypeCalls.class - [JAR]
├─ de.charite.compbio.jannovar.mendel.GenotypeCallsBuilder.class - [JAR]
├─ de.charite.compbio.jannovar.mendel.IncompatiblePedigreeException.class - [JAR]
├─ de.charite.compbio.jannovar.mendel.MendelianInheritanceChecker.class - [JAR]
├─ de.charite.compbio.jannovar.mendel.ModeOfInheritance.class - [JAR]
├─ de.charite.compbio.jannovar.mendel.SubModeOfInheritance.class - [JAR]
de.charite.compbio.jannovar.data.impl
├─ de.charite.compbio.jannovar.data.impl.VersionComparator.class - [JAR]
├─ de.charite.compbio.jannovar.data.impl.VersionTokenizer.class - [JAR]
de.charite.compbio.jannovar
├─ de.charite.compbio.jannovar.Immutable.class - [JAR]
├─ de.charite.compbio.jannovar.JannovarException.class - [JAR]
├─ de.charite.compbio.jannovar.UncheckedJannovarException.class - [JAR]
de.charite.compbio.jannovar.impl.parse.ensembl
├─ de.charite.compbio.jannovar.impl.parse.ensembl.EnsemblParser.class - [JAR]
de.charite.compbio.jannovar.impl.intervals
├─ de.charite.compbio.jannovar.impl.intervals.Interval.class - [JAR]
├─ de.charite.compbio.jannovar.impl.intervals.IntervalArray.class - [JAR]
├─ de.charite.compbio.jannovar.impl.intervals.IntervalEndExtractor.class - [JAR]
├─ de.charite.compbio.jannovar.impl.intervals.MutableInterval.class - [JAR]
de.charite.compbio.jannovar.impl.parse
├─ de.charite.compbio.jannovar.impl.parse.FASTAParser.class - [JAR]
├─ de.charite.compbio.jannovar.impl.parse.FASTARecord.class - [JAR]
├─ de.charite.compbio.jannovar.impl.parse.InvalidAttributeException.class - [JAR]
├─ de.charite.compbio.jannovar.impl.parse.ReferenceDictParser.class - [JAR]
├─ de.charite.compbio.jannovar.impl.parse.TranscriptParseException.class - [JAR]
├─ de.charite.compbio.jannovar.impl.parse.TranscriptParser.class - [JAR]
├─ de.charite.compbio.jannovar.impl.parse.TranscriptSupportLevelsSetterFromLengths.class - [JAR]
de.charite.compbio.jannovar.impl.parse.ucsc
├─ de.charite.compbio.jannovar.impl.parse.ucsc.UCSCParser.class - [JAR]
de.charite.compbio.jannovar.impl.parse.refseq
├─ de.charite.compbio.jannovar.impl.parse.refseq.RefSeqFastaRecordIdFormat.class - [JAR]
├─ de.charite.compbio.jannovar.impl.parse.refseq.RefSeqParser.class - [JAR]
de.charite.compbio.jannovar.datasource
├─ de.charite.compbio.jannovar.datasource.DataSource.class - [JAR]
├─ de.charite.compbio.jannovar.datasource.DataSourceFactory.class - [JAR]
├─ de.charite.compbio.jannovar.datasource.DatasourceOptions.class - [JAR]
├─ de.charite.compbio.jannovar.datasource.EnsemblDataSource.class - [JAR]
├─ de.charite.compbio.jannovar.datasource.EnsemblJannovarDataFactory.class - [JAR]
├─ de.charite.compbio.jannovar.datasource.FileDownloadException.class - [JAR]
├─ de.charite.compbio.jannovar.datasource.FileDownloader.class - [JAR]
├─ de.charite.compbio.jannovar.datasource.FlatBEDDataSource.class - [JAR]
├─ de.charite.compbio.jannovar.datasource.FlatBEDJannovarDataFactory.class - [JAR]
├─ de.charite.compbio.jannovar.datasource.InvalidDataSourceException.class - [JAR]
├─ de.charite.compbio.jannovar.datasource.JannovarDataFactory.class - [JAR]
├─ de.charite.compbio.jannovar.datasource.RefSeqDataSource.class - [JAR]
├─ de.charite.compbio.jannovar.datasource.RefSeqJannovarDataFactory.class - [JAR]
├─ de.charite.compbio.jannovar.datasource.TranscriptModelBuilderHGNCExtender.class - [JAR]
├─ de.charite.compbio.jannovar.datasource.UCSCDataSource.class - [JAR]
├─ de.charite.compbio.jannovar.datasource.UCSCJannovarDataFactory.class - [JAR]
de.charite.compbio.jannovar.mendel.impl
├─ de.charite.compbio.jannovar.mendel.impl.AbstractMendelianChecker.class - [JAR]
├─ de.charite.compbio.jannovar.mendel.impl.Candidate.class - [JAR]
├─ de.charite.compbio.jannovar.mendel.impl.InheritanceCheckerMT.class - [JAR]
├─ de.charite.compbio.jannovar.mendel.impl.MendelianCheckerAD.class - [JAR]
├─ de.charite.compbio.jannovar.mendel.impl.MendelianCheckerAR.class - [JAR]
├─ de.charite.compbio.jannovar.mendel.impl.MendelianCheckerARCompoundHet.class - [JAR]
├─ de.charite.compbio.jannovar.mendel.impl.MendelianCheckerARHom.class - [JAR]
├─ de.charite.compbio.jannovar.mendel.impl.MendelianCheckerXD.class - [JAR]
├─ de.charite.compbio.jannovar.mendel.impl.MendelianCheckerXR.class - [JAR]
├─ de.charite.compbio.jannovar.mendel.impl.MendelianCheckerXRCompoundHet.class - [JAR]
├─ de.charite.compbio.jannovar.mendel.impl.MendelianCheckerXRHom.class - [JAR]
de.charite.compbio.jannovar.annotation
├─ de.charite.compbio.jannovar.annotation.AllAnnotationListTextGenerator.class - [JAR]
├─ de.charite.compbio.jannovar.annotation.Annotation.class - [JAR]
├─ de.charite.compbio.jannovar.annotation.AnnotationException.class - [JAR]
├─ de.charite.compbio.jannovar.annotation.AnnotationLocation.class - [JAR]
├─ de.charite.compbio.jannovar.annotation.AnnotationLocationBuilder.class - [JAR]
├─ de.charite.compbio.jannovar.annotation.AnnotationMessage.class - [JAR]
├─ de.charite.compbio.jannovar.annotation.BestAnnotationListTextGenerator.class - [JAR]
├─ de.charite.compbio.jannovar.annotation.InvalidGenomeVariant.class - [JAR]
├─ de.charite.compbio.jannovar.annotation.OldVariantType.class - [JAR]
├─ de.charite.compbio.jannovar.annotation.PutativeImpact.class - [JAR]
├─ de.charite.compbio.jannovar.annotation.SVAnnotation.class - [JAR]
├─ de.charite.compbio.jannovar.annotation.SVAnnotations.class - [JAR]
├─ de.charite.compbio.jannovar.annotation.SVAnnotator.class - [JAR]
├─ de.charite.compbio.jannovar.annotation.VCFAnnotationData.class - [JAR]
├─ de.charite.compbio.jannovar.annotation.VCFSVAnnotationData.class - [JAR]
├─ de.charite.compbio.jannovar.annotation.VariantAnnotations.class - [JAR]
├─ de.charite.compbio.jannovar.annotation.VariantAnnotationsContentDecorator.class - [JAR]
├─ de.charite.compbio.jannovar.annotation.VariantAnnotationsTextGenerator.class - [JAR]
├─ de.charite.compbio.jannovar.annotation.VariantAnnotator.class - [JAR]
├─ de.charite.compbio.jannovar.annotation.VariantEffect.class - [JAR]
├─ de.charite.compbio.jannovar.annotation.VariantEffectPrinter.class - [JAR]
de.charite.compbio.jannovar.impl.util
├─ de.charite.compbio.jannovar.impl.util.DNAUtils.class - [JAR]
├─ de.charite.compbio.jannovar.impl.util.IndexedFASTAReader.class - [JAR]
├─ de.charite.compbio.jannovar.impl.util.PathUtil.class - [JAR]
├─ de.charite.compbio.jannovar.impl.util.ProgressBar.class - [JAR]
├─ de.charite.compbio.jannovar.impl.util.StringUtil.class - [JAR]
├─ de.charite.compbio.jannovar.impl.util.Translator.class - [JAR]
de.charite.compbio.jannovar.reference
├─ de.charite.compbio.jannovar.reference.Alignment.class - [JAR]
├─ de.charite.compbio.jannovar.reference.AminoAcidChange.class - [JAR]
├─ de.charite.compbio.jannovar.reference.AminoAcidChangeNormalizer.class - [JAR]
├─ de.charite.compbio.jannovar.reference.Anchor.class - [JAR]
├─ de.charite.compbio.jannovar.reference.Anchors.class - [JAR]
├─ de.charite.compbio.jannovar.reference.CDSInterval.class - [JAR]
├─ de.charite.compbio.jannovar.reference.CDSPosition.class - [JAR]
├─ de.charite.compbio.jannovar.reference.DuplicationChecker.class - [JAR]
├─ de.charite.compbio.jannovar.reference.GenomeInterval.class - [JAR]
├─ de.charite.compbio.jannovar.reference.GenomePosition.class - [JAR]
├─ de.charite.compbio.jannovar.reference.GenomeVariant.class - [JAR]
├─ de.charite.compbio.jannovar.reference.GenomeVariantNormalizer.class - [JAR]
├─ de.charite.compbio.jannovar.reference.GenomeVariantType.class - [JAR]
├─ de.charite.compbio.jannovar.reference.HG19RefDictBuilder.class - [JAR]
├─ de.charite.compbio.jannovar.reference.InvalidCodonException.class - [JAR]
├─ de.charite.compbio.jannovar.reference.InvalidCoordinateException.class - [JAR]
├─ de.charite.compbio.jannovar.reference.NucleotidePointLocationBuilder.class - [JAR]
├─ de.charite.compbio.jannovar.reference.PositionType.class - [JAR]
├─ de.charite.compbio.jannovar.reference.ProjectionException.class - [JAR]
├─ de.charite.compbio.jannovar.reference.SVBreakend.class - [JAR]
├─ de.charite.compbio.jannovar.reference.SVCopyNumberVariant.class - [JAR]
├─ de.charite.compbio.jannovar.reference.SVDeletion.class - [JAR]
├─ de.charite.compbio.jannovar.reference.SVDescription.class - [JAR]
├─ de.charite.compbio.jannovar.reference.SVDuplication.class - [JAR]
├─ de.charite.compbio.jannovar.reference.SVGenomeVariant.class - [JAR]
├─ de.charite.compbio.jannovar.reference.SVInsertion.class - [JAR]
├─ de.charite.compbio.jannovar.reference.SVInversion.class - [JAR]
├─ de.charite.compbio.jannovar.reference.SVMobileElementDeletion.class - [JAR]
├─ de.charite.compbio.jannovar.reference.SVMobileElementInsertion.class - [JAR]
├─ de.charite.compbio.jannovar.reference.SVTandemDuplication.class - [JAR]
├─ de.charite.compbio.jannovar.reference.SVUnknown.class - [JAR]
├─ de.charite.compbio.jannovar.reference.Strand.class - [JAR]
├─ de.charite.compbio.jannovar.reference.TranscriptInterval.class - [JAR]
├─ de.charite.compbio.jannovar.reference.TranscriptIntervalEndExtractor.class - [JAR]
├─ de.charite.compbio.jannovar.reference.TranscriptModel.class - [JAR]
├─ de.charite.compbio.jannovar.reference.TranscriptModelBuilder.class - [JAR]
├─ de.charite.compbio.jannovar.reference.TranscriptPosition.class - [JAR]
├─ de.charite.compbio.jannovar.reference.TranscriptProjectionDecorator.class - [JAR]
├─ de.charite.compbio.jannovar.reference.TranscriptSequenceChangeHelper.class - [JAR]
├─ de.charite.compbio.jannovar.reference.TranscriptSequenceDecorator.class - [JAR]
├─ de.charite.compbio.jannovar.reference.TranscriptSequenceOntologyDecorator.class - [JAR]
├─ de.charite.compbio.jannovar.reference.TranscriptSupportLevels.class - [JAR]
├─ de.charite.compbio.jannovar.reference.VariantDataCorrector.class - [JAR]
├─ de.charite.compbio.jannovar.reference.VariantDescription.class - [JAR]
de.charite.compbio.jannovar.impl.parse.gtfgff
├─ de.charite.compbio.jannovar.impl.parse.gtfgff.FeatureRecord.class - [JAR]
├─ de.charite.compbio.jannovar.impl.parse.gtfgff.FeatureRecordParser.class - [JAR]
├─ de.charite.compbio.jannovar.impl.parse.gtfgff.GFFParser.class - [JAR]
├─ de.charite.compbio.jannovar.impl.parse.gtfgff.GFFRecordParser.class - [JAR]
├─ de.charite.compbio.jannovar.impl.parse.gtfgff.GTFRecordParser.class - [JAR]
de.charite.compbio.jannovar.pedigree
├─ de.charite.compbio.jannovar.pedigree.Disease.class - [JAR]
├─ de.charite.compbio.jannovar.pedigree.Genotype.class - [JAR]
├─ de.charite.compbio.jannovar.pedigree.GenotypeList.class - [JAR]
├─ de.charite.compbio.jannovar.pedigree.GenotypeListBuilder.class - [JAR]
├─ de.charite.compbio.jannovar.pedigree.PedFileContents.class - [JAR]
├─ de.charite.compbio.jannovar.pedigree.PedFileReader.class - [JAR]
├─ de.charite.compbio.jannovar.pedigree.PedFileWriter.class - [JAR]
├─ de.charite.compbio.jannovar.pedigree.PedParseException.class - [JAR]
├─ de.charite.compbio.jannovar.pedigree.PedPerson.class - [JAR]
├─ de.charite.compbio.jannovar.pedigree.Pedigree.class - [JAR]
├─ de.charite.compbio.jannovar.pedigree.PedigreeExtractor.class - [JAR]
├─ de.charite.compbio.jannovar.pedigree.PedigreeQueryDecorator.class - [JAR]
├─ de.charite.compbio.jannovar.pedigree.Person.class - [JAR]
├─ de.charite.compbio.jannovar.pedigree.Sex.class - [JAR]
de.charite.compbio.jannovar.impl.parse.flatbed
├─ de.charite.compbio.jannovar.impl.parse.flatbed.FlatBEDFastaParser.class - [JAR]
├─ de.charite.compbio.jannovar.impl.parse.flatbed.FlatBEDParser.class - [JAR]
de.charite.compbio.jannovar.data
├─ de.charite.compbio.jannovar.data.Chromosome.class - [JAR]
├─ de.charite.compbio.jannovar.data.JannovarData.class - [JAR]
├─ de.charite.compbio.jannovar.data.JannovarDataSerializer.class - [JAR]
├─ de.charite.compbio.jannovar.data.ReferenceDictionary.class - [JAR]
├─ de.charite.compbio.jannovar.data.ReferenceDictionaryBuilder.class - [JAR]
├─ de.charite.compbio.jannovar.data.SerializationException.class - [JAR]
