View Java Class Source Code in JAR file
- Download JD-GUI to open JAR file and explore Java source code file (.class .java)
- Click menu "File → Open File..." or just drag-and-drop the JAR file in the JD-GUI window biojava3-core-3.0.jar file.
Once you open a JAR file, all the java classes in the JAR file will be displayed.
org.biojava3.core.sequence.views
├─ org.biojava3.core.sequence.views.ComplementSequenceView.class - [JAR]
├─ org.biojava3.core.sequence.views.ReversedSequenceView.class - [JAR]
├─ org.biojava3.core.sequence.views.RnaSequenceView.class - [JAR]
├─ org.biojava3.core.sequence.views.WindowedSequence.class - [JAR]
org.biojava3.core.sequence.location
├─ org.biojava3.core.sequence.location.FuzzyPoint.class - [JAR]
├─ org.biojava3.core.sequence.location.InsdcLocations.class - [JAR]
├─ org.biojava3.core.sequence.location.InsdcParser.class - [JAR]
├─ org.biojava3.core.sequence.location.LocationHelper.class - [JAR]
├─ org.biojava3.core.sequence.location.SequenceLocation.class - [JAR]
├─ org.biojava3.core.sequence.location.SimpleLocation.class - [JAR]
├─ org.biojava3.core.sequence.location.SimplePoint.class - [JAR]
org.biojava3.core.sequence
├─ org.biojava3.core.sequence.AccessionID.class - [JAR]
├─ org.biojava3.core.sequence.BasicSequence.class - [JAR]
├─ org.biojava3.core.sequence.CDSComparator.class - [JAR]
├─ org.biojava3.core.sequence.CDSSequence.class - [JAR]
├─ org.biojava3.core.sequence.ChromosomeSequence.class - [JAR]
├─ org.biojava3.core.sequence.DNASequence.class - [JAR]
├─ org.biojava3.core.sequence.DataSource.class - [JAR]
├─ org.biojava3.core.sequence.ExonComparator.class - [JAR]
├─ org.biojava3.core.sequence.ExonSequence.class - [JAR]
├─ org.biojava3.core.sequence.GeneSequence.class - [JAR]
├─ org.biojava3.core.sequence.IntronSequence.class - [JAR]
├─ org.biojava3.core.sequence.MultipleSequenceAlignment.class - [JAR]
├─ org.biojava3.core.sequence.ProteinSequence.class - [JAR]
├─ org.biojava3.core.sequence.RNASequence.class - [JAR]
├─ org.biojava3.core.sequence.SequenceComparator.class - [JAR]
├─ org.biojava3.core.sequence.SequenceOptimizationHints.class - [JAR]
├─ org.biojava3.core.sequence.StartCodonSequence.class - [JAR]
├─ org.biojava3.core.sequence.StopCodonSequence.class - [JAR]
├─ org.biojava3.core.sequence.Strand.class - [JAR]
├─ org.biojava3.core.sequence.TaxonomyID.class - [JAR]
├─ org.biojava3.core.sequence.TranscriptSequence.class - [JAR]
org.biojava3.core.sequence.template
├─ org.biojava3.core.sequence.template.AbstractCompound.class - [JAR]
├─ org.biojava3.core.sequence.template.AbstractCompoundSet.class - [JAR]
├─ org.biojava3.core.sequence.template.AbstractCompoundTranslator.class - [JAR]
├─ org.biojava3.core.sequence.template.AbstractNucleotideCompoundSet.class - [JAR]
├─ org.biojava3.core.sequence.template.AbstractSequence.class - [JAR]
├─ org.biojava3.core.sequence.template.Accessioned.class - [JAR]
├─ org.biojava3.core.sequence.template.ComplementCompound.class - [JAR]
├─ org.biojava3.core.sequence.template.Compound.class - [JAR]
├─ org.biojava3.core.sequence.template.CompoundSet.class - [JAR]
├─ org.biojava3.core.sequence.template.CompoundTranslator.class - [JAR]
├─ org.biojava3.core.sequence.template.LightweightProfile.class - [JAR]
├─ org.biojava3.core.sequence.template.ProxySequenceReader.class - [JAR]
├─ org.biojava3.core.sequence.template.Sequence.class - [JAR]
├─ org.biojava3.core.sequence.template.SequenceMixin.class - [JAR]
├─ org.biojava3.core.sequence.template.SequenceProxyView.class - [JAR]
├─ org.biojava3.core.sequence.template.SequenceReader.class - [JAR]
├─ org.biojava3.core.sequence.template.SequenceView.class - [JAR]
org.biojava3.core.sequence.compound
├─ org.biojava3.core.sequence.compound.AmbiguityDNACompoundSet.class - [JAR]
├─ org.biojava3.core.sequence.compound.AmbiguityRNACompoundSet.class - [JAR]
├─ org.biojava3.core.sequence.compound.AminoAcidCompound.class - [JAR]
├─ org.biojava3.core.sequence.compound.AminoAcidCompoundSet.class - [JAR]
├─ org.biojava3.core.sequence.compound.CodonCompound.class - [JAR]
├─ org.biojava3.core.sequence.compound.DNACompoundSet.class - [JAR]
├─ org.biojava3.core.sequence.compound.NucleotideCompound.class - [JAR]
├─ org.biojava3.core.sequence.compound.RNACompoundSet.class - [JAR]
org.biojava3.core.sequence.loader
├─ org.biojava3.core.sequence.loader.ArrayListProxySequenceReader.class - [JAR]
├─ org.biojava3.core.sequence.loader.SequenceFileProxyLoader.class - [JAR]
├─ org.biojava3.core.sequence.loader.StringProxySequenceReader.class - [JAR]
├─ org.biojava3.core.sequence.loader.UniprotProxySequenceReader.class - [JAR]
org.biojava3.core.sequence.io.util
├─ org.biojava3.core.sequence.io.util.ClasspathResource.class - [JAR]
├─ org.biojava3.core.sequence.io.util.IOUtils.class - [JAR]
org.biojava3.core.sequence.storage
├─ org.biojava3.core.sequence.storage.ArrayListSequenceReader.class - [JAR]
├─ org.biojava3.core.sequence.storage.BitSequenceReader.class - [JAR]
├─ org.biojava3.core.sequence.storage.FourBitSequenceReader.class - [JAR]
├─ org.biojava3.core.sequence.storage.JoiningSequenceReader.class - [JAR]
├─ org.biojava3.core.sequence.storage.SequenceAsStringHelper.class - [JAR]
├─ org.biojava3.core.sequence.storage.SingleCompoundSequenceReader.class - [JAR]
├─ org.biojava3.core.sequence.storage.TwoBitSequenceReader.class - [JAR]
org.biojava3.core.sequence.edits
├─ org.biojava3.core.sequence.edits.Edit.class - [JAR]
org.biojava3.core.sequence.location.template
├─ org.biojava3.core.sequence.location.template.AbstractLocation.class - [JAR]
├─ org.biojava3.core.sequence.location.template.AccesionedLocation.class - [JAR]
├─ org.biojava3.core.sequence.location.template.Location.class - [JAR]
├─ org.biojava3.core.sequence.location.template.Point.class - [JAR]
org.biojava3.core.sequence.transcription
├─ org.biojava3.core.sequence.transcription.CaseInsensitiveCompound.class - [JAR]
├─ org.biojava3.core.sequence.transcription.DNAToRNATranslator.class - [JAR]
├─ org.biojava3.core.sequence.transcription.Frame.class - [JAR]
├─ org.biojava3.core.sequence.transcription.RNAToAminoAcidTranslator.class - [JAR]
├─ org.biojava3.core.sequence.transcription.Table.class - [JAR]
├─ org.biojava3.core.sequence.transcription.TranscriptionEngine.class - [JAR]
org.biojava3.core.sequence.io
├─ org.biojava3.core.sequence.io.BufferedReaderBytesRead.class - [JAR]
├─ org.biojava3.core.sequence.io.DNASequenceCreator.class - [JAR]
├─ org.biojava3.core.sequence.io.FastaGeneWriter.class - [JAR]
├─ org.biojava3.core.sequence.io.FastaReader.class - [JAR]
├─ org.biojava3.core.sequence.io.FastaReaderHelper.class - [JAR]
├─ org.biojava3.core.sequence.io.FastaSequenceParser.class - [JAR]
├─ org.biojava3.core.sequence.io.FastaWriter.class - [JAR]
├─ org.biojava3.core.sequence.io.FastaWriterHelper.class - [JAR]
├─ org.biojava3.core.sequence.io.FileProxyProteinSequenceCreator.class - [JAR]
├─ org.biojava3.core.sequence.io.GenericFastaHeaderFormat.class - [JAR]
├─ org.biojava3.core.sequence.io.GenericFastaHeaderParser.class - [JAR]
├─ org.biojava3.core.sequence.io.IUPACParser.class - [JAR]
├─ org.biojava3.core.sequence.io.ProteinSequenceCreator.class - [JAR]
├─ org.biojava3.core.sequence.io.RNASequenceCreator.class - [JAR]
org.biojava3.core.sequence.io.template
├─ org.biojava3.core.sequence.io.template.FastaHeaderFormatInterface.class - [JAR]
├─ org.biojava3.core.sequence.io.template.FastaHeaderParserInterface.class - [JAR]
├─ org.biojava3.core.sequence.io.template.SequenceCreatorInterface.class - [JAR]
├─ org.biojava3.core.sequence.io.template.SequenceParserInterface.class - [JAR]
org.biojava3.core.exceptions
├─ org.biojava3.core.exceptions.CompoundNotFoundError.class - [JAR]
├─ org.biojava3.core.exceptions.FileAccessError.class - [JAR]
├─ org.biojava3.core.exceptions.HeaderParseException.class - [JAR]
├─ org.biojava3.core.exceptions.ParserException.class - [JAR]
├─ org.biojava3.core.exceptions.SequenceLengthError.class - [JAR]
├─ org.biojava3.core.exceptions.TranslationException.class - [JAR]
org.biojava3.core.util
├─ org.biojava3.core.util.CRC64Checksum.class - [JAR]
├─ org.biojava3.core.util.ConcurrencyTools.class - [JAR]
├─ org.biojava3.core.util.Equals.class - [JAR]
├─ org.biojava3.core.util.FlatFileCache.class - [JAR]
├─ org.biojava3.core.util.Hashcoder.class - [JAR]
├─ org.biojava3.core.util.InputStreamProvider.class - [JAR]
├─ org.biojava3.core.util.PrettyXMLWriter.class - [JAR]
├─ org.biojava3.core.util.SequenceTools.class - [JAR]
├─ org.biojava3.core.util.SoftHashMap.class - [JAR]
├─ org.biojava3.core.util.UncompressInputStream.class - [JAR]
├─ org.biojava3.core.util.XMLHelper.class - [JAR]
├─ org.biojava3.core.util.XMLWriter.class - [JAR]
org.biojava3.core.sequence.features
├─ org.biojava3.core.sequence.features.AbstractFeature.class - [JAR]
├─ org.biojava3.core.sequence.features.DBReferenceInfo.class - [JAR]
├─ org.biojava3.core.sequence.features.DatabaseReferenceInterface.class - [JAR]
├─ org.biojava3.core.sequence.features.FeatureInterface.class - [JAR]
├─ org.biojava3.core.sequence.features.FeaturesKeyWordInterface.class - [JAR]
├─ org.biojava3.core.sequence.features.QuantityFeature.class - [JAR]
├─ org.biojava3.core.sequence.features.TextFeature.class - [JAR]
