jar

org.biopax.paxtools : pattern

Maven & Gradle

Aug 06, 2023
1 usages
25 stars

BioPAX Pattern Search · The BioPAX Pattern Search library; also, e.g., converts BioPAX model to SIF (simple binary interactions) text format.

Table Of Contents

Latest Version

Download org.biopax.paxtools : pattern JAR file - Latest Versions:

All Versions

Download org.biopax.paxtools : pattern JAR file - All Versions:

Version Vulnerabilities Size Updated
5.3.x
5.2.x
5.1.x
5.0.x
4.3.x

View Java Class Source Code in JAR file

  1. Download JD-GUI to open JAR file and explore Java source code file (.class .java)
  2. Click menu "File → Open File..." or just drag-and-drop the JAR file in the JD-GUI window pattern-5.2.1.jar file.
    Once you open a JAR file, all the java classes in the JAR file will be displayed.

org.biopax.paxtools.pattern

├─ org.biopax.paxtools.pattern.Constraint.class - [JAR]

├─ org.biopax.paxtools.pattern.MappedConst.class - [JAR]

├─ org.biopax.paxtools.pattern.Match.class - [JAR]

├─ org.biopax.paxtools.pattern.Pattern.class - [JAR]

├─ org.biopax.paxtools.pattern.PatternBox.class - [JAR]

├─ org.biopax.paxtools.pattern.Searcher.class - [JAR]

org.biopax.paxtools.pattern.util

├─ org.biopax.paxtools.pattern.util.AdjacencyMatrix.class - [JAR]

├─ org.biopax.paxtools.pattern.util.Blacklist.class - [JAR]

├─ org.biopax.paxtools.pattern.util.ChemicalNameNormalizer.class - [JAR]

├─ org.biopax.paxtools.pattern.util.DifferentialModificationUtil.class - [JAR]

├─ org.biopax.paxtools.pattern.util.HGNC.class - [JAR]

├─ org.biopax.paxtools.pattern.util.PhysicalEntityChain.class - [JAR]

├─ org.biopax.paxtools.pattern.util.ProgressWatcher.class - [JAR]

├─ org.biopax.paxtools.pattern.util.RelType.class - [JAR]

org.biopax.paxtools.pattern.example

├─ org.biopax.paxtools.pattern.example.DeltaFeatureExtractor.class - [JAR]

org.biopax.paxtools.pattern.constraint

├─ org.biopax.paxtools.pattern.constraint.AND.class - [JAR]

├─ org.biopax.paxtools.pattern.constraint.ActivityConstraint.class - [JAR]

├─ org.biopax.paxtools.pattern.constraint.ActivityModificationChangeConstraint.class - [JAR]

├─ org.biopax.paxtools.pattern.constraint.ConBox.class - [JAR]

├─ org.biopax.paxtools.pattern.constraint.ConstraintAdapter.class - [JAR]

├─ org.biopax.paxtools.pattern.constraint.ConstraintChain.class - [JAR]

├─ org.biopax.paxtools.pattern.constraint.ControlToControllerER.class - [JAR]

├─ org.biopax.paxtools.pattern.constraint.ControlsNotParticipant.class - [JAR]

├─ org.biopax.paxtools.pattern.constraint.ConversionSide.class - [JAR]

├─ org.biopax.paxtools.pattern.constraint.Empty.class - [JAR]

├─ org.biopax.paxtools.pattern.constraint.Equality.class - [JAR]

├─ org.biopax.paxtools.pattern.constraint.Field.class - [JAR]

├─ org.biopax.paxtools.pattern.constraint.FieldOfMultiple.class - [JAR]

├─ org.biopax.paxtools.pattern.constraint.HasAnID.class - [JAR]

├─ org.biopax.paxtools.pattern.constraint.IDConstraint.class - [JAR]

├─ org.biopax.paxtools.pattern.constraint.InterToPartER.class - [JAR]

├─ org.biopax.paxtools.pattern.constraint.LinkedPE.class - [JAR]

├─ org.biopax.paxtools.pattern.constraint.ModificationChangeConstraint.class - [JAR]

├─ org.biopax.paxtools.pattern.constraint.MultiPathConstraint.class - [JAR]

├─ org.biopax.paxtools.pattern.constraint.NOT.class - [JAR]

├─ org.biopax.paxtools.pattern.constraint.NonUbique.class - [JAR]

├─ org.biopax.paxtools.pattern.constraint.OR.class - [JAR]

├─ org.biopax.paxtools.pattern.constraint.PEChainsIntersect.class - [JAR]

├─ org.biopax.paxtools.pattern.constraint.Participant.class - [JAR]

├─ org.biopax.paxtools.pattern.constraint.ParticipatesInConv.class - [JAR]

├─ org.biopax.paxtools.pattern.constraint.PathConstraint.class - [JAR]

├─ org.biopax.paxtools.pattern.constraint.RelatedControl.class - [JAR]

├─ org.biopax.paxtools.pattern.constraint.SelfOrThis.class - [JAR]

├─ org.biopax.paxtools.pattern.constraint.Size.class - [JAR]

├─ org.biopax.paxtools.pattern.constraint.Type.class - [JAR]

├─ org.biopax.paxtools.pattern.constraint.XOR.class - [JAR]

org.biopax.paxtools.pattern.miner

├─ org.biopax.paxtools.pattern.miner.AbstractSIFMiner.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.BlacklistGenerator.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.BlacklistGenerator2.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.BlacklistGenerator3.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.CSCOBothControllerAndParticipantMiner.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.CSCOButIsParticipantMiner.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.CSCOThroughBindingSmallMoleculeMiner.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.CSCOThroughControllingSmallMoleculeMiner.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.CSCOThroughDegradationMiner.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.CatalysisPrecedesMiner.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.ChemicalAffectsThroughBindingMiner.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.ChemicalAffectsThroughControlMiner.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.CommonIDFetcher.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.ConfigurableIDFetcher.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.ConsumptionControlledByMiner.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.ControlsDegradationIndirectMiner.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.ControlsExpressionMiner.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.ControlsExpressionWithConvMiner.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.ControlsPhosphorylationMiner.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.ControlsProductionOfMiner.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.ControlsStateChangeDetailedMiner.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.ControlsStateChangeOfMiner.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.ControlsTransportMiner.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.ControlsTransportOfChemicalMiner.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.CustomFormat.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.Dialog.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.DirectedRelationMiner.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.ExtendedSIFWriter.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.IDFetcher.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.InComplexWithMiner.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.InteractsWithMiner.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.Miner.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.MinerAdapter.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.NeighborOfMiner.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.OutputColumn.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.ReactsWithMiner.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.RelatedGenesOfInteractionsMiner.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.SIFEnum.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.SIFInteraction.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.SIFMiner.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.SIFSearcher.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.SIFToText.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.SIFType.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.SimpleIDFetcher.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.UbiquitousIDMiner.class - [JAR]

├─ org.biopax.paxtools.pattern.miner.UsedToProduceMiner.class - [JAR]

Advertisement

Dependencies from Group

Aug 06, 2023
16 usages
25 stars
Aug 06, 2023
1 usages
25 stars
Aug 06, 2023
1 usages
25 stars
Aug 06, 2023
1 usages
17 stars
Sep 22, 2015
25 stars

Discover Dependencies

Sep 08, 2017
2 usages
740 stars
Nov 10, 2022
35 stars
May 12, 2016
0 stars
Sep 06, 2016
2 usages
2 stars
Sep 06, 2016
2 usages
1 stars
Sep 23, 2016
2 usages
2 stars
Mar 26, 2019
3 usages
40 stars
Feb 06, 2017
2 usages
82 stars
Sep 14, 2017
2 usages
0 stars
Feb 02, 2023
23 usages
17 stars