Download somatic.jar - @org.campagnelab.dl

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Latest Version

Download org.campagnelab.dl : somatic JAR file - Latest Versions:

Latest Stable: 1.4.0.jar

All Versions

Download org.campagnelab.dl : somatic JAR file - All Versions:

Version	Vulnerabilities	Size	Updated
1.4.x	somatic-1.4.0.jar		355.45 KB	Nov 15, 2017
1.3.x	somatic-1.3.2.jar		342.43 KB	Jul 06, 2017
somatic-1.3.1.jar		339.70 KB	Jun 09, 2017
1.3	somatic-1.3.jar		338.36 KB	May 24, 2017
1.2.x	somatic-1.2.4.jar		336.95 KB	Apr 07, 2017
somatic-1.2.3.jar		336.63 KB	Mar 01, 2017
somatic-1.2.2.jar		331.09 KB	Feb 17, 2017
somatic-1.2.1.jar		328.41 KB	Jan 20, 2017
1.2	somatic-1.2.jar		328.41 KB	Jan 03, 2017
1.1.x	somatic-1.1.1.jar		321.59 KB	Dec 12, 2016
1.1	somatic-1.1.jar		321.41 KB	Dec 08, 2016

Version

Vulnerabilities

Size

Updated

1.4.x

somatic-1.4.0.jar

355.45 KB

Nov 15, 2017

1.3.x

somatic-1.3.2.jar

342.43 KB

Jul 06, 2017

somatic-1.3.1.jar

339.70 KB

Jun 09, 2017

1.3

somatic-1.3.jar

338.36 KB

May 24, 2017

1.2.x

somatic-1.2.4.jar

336.95 KB

Apr 07, 2017

somatic-1.2.3.jar

336.63 KB

Mar 01, 2017

somatic-1.2.2.jar

331.09 KB

Feb 17, 2017

somatic-1.2.1.jar

328.41 KB

Jan 20, 2017

1.2

somatic-1.2.jar

328.41 KB

Jan 03, 2017

1.1.x

somatic-1.1.1.jar

321.59 KB

Dec 12, 2016

1.1

somatic-1.1.jar

321.41 KB

Dec 08, 2016

View Java Class Source Code in JAR file

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Click menu "File → Open File..." or just drag-and-drop the JAR file in the JD-GUI window somatic-1.4.0.jar file.
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org.campagnelab.dl.somatic.learning.architecture.graphs

├─ org.campagnelab.dl.somatic.learning.architecture.graphs.SixDenseLayersNarrower2.class - [JAR]

├─ org.campagnelab.dl.somatic.learning.architecture.graphs.SixDenseLayersNarrower2WithFrequency.class - [JAR]

├─ org.campagnelab.dl.somatic.learning.architecture.graphs.SixDenseLayersNarrower2WithFrequencyAndBase.class - [JAR]

org.campagnelab.dl.somatic.util

├─ org.campagnelab.dl.somatic.util.ErrorRecord.class - [JAR]

├─ org.campagnelab.dl.somatic.util.GenomicSitesVisited.class - [JAR]

├─ org.campagnelab.dl.somatic.util.HitBoundedPriorityQueue.class - [JAR]

org.campagnelab.dl.somatic.learning.architecture

├─ org.campagnelab.dl.somatic.learning.architecture.AbstractNeuralNetAssembler.class - [JAR]

├─ org.campagnelab.dl.somatic.learning.architecture.CalibrationAssembler.class - [JAR]

├─ org.campagnelab.dl.somatic.learning.architecture.EStatusListener.class - [JAR]

├─ org.campagnelab.dl.somatic.learning.architecture.SixDenseLayers.class - [JAR]

├─ org.campagnelab.dl.somatic.learning.architecture.SixDenseLayersForGPU.class - [JAR]

├─ org.campagnelab.dl.somatic.learning.architecture.SixDenseLayersNarrower.class - [JAR]

├─ org.campagnelab.dl.somatic.learning.architecture.SixDenseLayersNarrower2.class - [JAR]

├─ org.campagnelab.dl.somatic.learning.architecture.SixDenseLayersNarrower2BatchNormalization.class - [JAR]

├─ org.campagnelab.dl.somatic.learning.architecture.SixDenseLayersNarrower3.class - [JAR]

├─ org.campagnelab.dl.somatic.learning.architecture.ThreeDenseLayers.class - [JAR]

org.campagnelab.dl.somatic.mappers.trio

├─ org.campagnelab.dl.somatic.mappers.trio.AbstractFeatureMapperTrio.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.trio.FeatureMapperV18Trio.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.trio.FeatureMapperV25Trio.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.trio.FractionDifferences4Trio.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.trio.IndelFeaturesTrio.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.trio.MagnitudeFeatures2Trio.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.trio.ReadIndexFeaturesTrio.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.trio.SimpleFeatureCalculatorTrio.class - [JAR]

org.campagnelab.dl.somatic.tools

├─ org.campagnelab.dl.somatic.tools.CombineWithGoldStandard.class - [JAR]

├─ org.campagnelab.dl.somatic.tools.CombineWithGoldStandardArguments.class - [JAR]

├─ org.campagnelab.dl.somatic.tools.MapFeatures.class - [JAR]

├─ org.campagnelab.dl.somatic.tools.MapFeaturesS.class - [JAR]

├─ org.campagnelab.dl.somatic.tools.Mutate.class - [JAR]

├─ org.campagnelab.dl.somatic.tools.MutateArguments.class - [JAR]

├─ org.campagnelab.dl.somatic.tools.PredictS.class - [JAR]

├─ org.campagnelab.dl.somatic.tools.Print.class - [JAR]

├─ org.campagnelab.dl.somatic.tools.PrintArguments.class - [JAR]

├─ org.campagnelab.dl.somatic.tools.QuickConcat.class - [JAR]

├─ org.campagnelab.dl.somatic.tools.Randomize.class - [JAR]

├─ org.campagnelab.dl.somatic.tools.RandomizerArguments.class - [JAR]

├─ org.campagnelab.dl.somatic.tools.ShowS.class - [JAR]

├─ org.campagnelab.dl.somatic.tools.Simplify.class - [JAR]

├─ org.campagnelab.dl.somatic.tools.SimplifyArguments.class - [JAR]

├─ org.campagnelab.dl.somatic.tools.SomaticMapFeaturesArguments.class - [JAR]

├─ org.campagnelab.dl.somatic.tools.SomaticShowArguments.class - [JAR]

├─ org.campagnelab.dl.somatic.tools.Split.class - [JAR]

├─ org.campagnelab.dl.somatic.tools.SplitArguments.class - [JAR]

├─ org.campagnelab.dl.somatic.tools.SplitByChromosome.class - [JAR]

├─ org.campagnelab.dl.somatic.tools.SplitByChromosomeArguments.class - [JAR]

org.campagnelab.dl.somatic.mappers.functional

├─ org.campagnelab.dl.somatic.mappers.functional.TraversalHelper.class - [JAR]

org.campagnelab.dl.somatic.intermediaries

├─ org.campagnelab.dl.somatic.intermediaries.FilteredNonFiltered.class - [JAR]

├─ org.campagnelab.dl.somatic.intermediaries.FirstSimulationStrategy.class - [JAR]

├─ org.campagnelab.dl.somatic.intermediaries.Intermediary.class - [JAR]

├─ org.campagnelab.dl.somatic.intermediaries.OneSampleCanonicalSimulationStrategy.class - [JAR]

├─ org.campagnelab.dl.somatic.intermediaries.QuickConcatArguments.class - [JAR]

├─ org.campagnelab.dl.somatic.intermediaries.Randomizer.class - [JAR]

├─ org.campagnelab.dl.somatic.intermediaries.SimulationCharacteristics.class - [JAR]

├─ org.campagnelab.dl.somatic.intermediaries.SimulationStrategy.class - [JAR]

├─ org.campagnelab.dl.somatic.intermediaries.ThreeSampleSimulationStrategyImplTrio.class - [JAR]

├─ org.campagnelab.dl.somatic.intermediaries.TwoSampleCanonicalSimulationStrategy.class - [JAR]

├─ org.campagnelab.dl.somatic.intermediaries.TwoSampleSimulationStrategyTrio.class - [JAR]

org.campagnelab.dl.somatic.learning.performance

├─ org.campagnelab.dl.somatic.learning.performance.MeasurePerformance.class - [JAR]

org.campagnelab.dl.somatic.learning.features

├─ org.campagnelab.dl.somatic.learning.features.Features.class - [JAR]

org.campagnelab.dl.somatic.learning.domains.predictions

├─ org.campagnelab.dl.somatic.learning.domains.predictions.IsMutatedBasePrediction.class - [JAR]

├─ org.campagnelab.dl.somatic.learning.domains.predictions.IsMutatedPrediction.class - [JAR]

├─ org.campagnelab.dl.somatic.learning.domains.predictions.IsSomaticMutationInterpreter.class - [JAR]

├─ org.campagnelab.dl.somatic.learning.domains.predictions.SomaticFrequencyPrediction.class - [JAR]

org.campagnelab.dl.somatic.predictions

├─ org.campagnelab.dl.somatic.predictions.DLSomaticPredictor.class - [JAR]

├─ org.campagnelab.dl.somatic.predictions.SomaticModel.class - [JAR]

org.campagnelab.dl.somatic.learning.calibrate

├─ org.campagnelab.dl.somatic.learning.calibrate.CalibrateModelOutput.class - [JAR]

├─ org.campagnelab.dl.somatic.learning.calibrate.CalibratingModel.class - [JAR]

org.campagnelab.dl.somatic.storage

├─ org.campagnelab.dl.somatic.storage.DownSampler.class - [JAR]

├─ org.campagnelab.dl.somatic.storage.DualReader.class - [JAR]

├─ org.campagnelab.dl.somatic.storage.FeatureCollector.class - [JAR]

├─ org.campagnelab.dl.somatic.storage.ProtobufPrinter.class - [JAR]

├─ org.campagnelab.dl.somatic.storage.RecordIterable.class - [JAR]

├─ org.campagnelab.dl.somatic.storage.RecordReader.class - [JAR]

├─ org.campagnelab.dl.somatic.storage.RecordReaderI.class - [JAR]

├─ org.campagnelab.dl.somatic.storage.RecordSpliterator.class - [JAR]

├─ org.campagnelab.dl.somatic.storage.RecordWriter.class - [JAR]

org.campagnelab.dl.somatic.utils

├─ org.campagnelab.dl.somatic.utils.BayesCalibrator.class - [JAR]

├─ org.campagnelab.dl.somatic.utils.CalcCalibrator.class - [JAR]

├─ org.campagnelab.dl.somatic.utils.FDREstimator.class - [JAR]

├─ org.campagnelab.dl.somatic.utils.ProtoPredictor.class - [JAR]

org.campagnelab.dl.somatic.learning.domains

├─ org.campagnelab.dl.somatic.learning.domains.IsBaseMutatedInterpreter.class - [JAR]

├─ org.campagnelab.dl.somatic.learning.domains.SomaticFrequencyInterpreter.class - [JAR]

├─ org.campagnelab.dl.somatic.learning.domains.SomaticMutationDomainDescriptor.class - [JAR]

org.campagnelab.dl.somatic.genotypes

├─ org.campagnelab.dl.somatic.genotypes.BaseGenotypeCountFactory.class - [JAR]

├─ org.campagnelab.dl.somatic.genotypes.GenotypeCountFactory.class - [JAR]

org.campagnelab.dl.somatic.learning.iterators

├─ org.campagnelab.dl.somatic.learning.iterators.BaseInformationConcatIterator.class - [JAR]

├─ org.campagnelab.dl.somatic.learning.iterators.BaseInformationIterator.class - [JAR]

├─ org.campagnelab.dl.somatic.learning.iterators.CachedConcatIterator.class - [JAR]

├─ org.campagnelab.dl.somatic.learning.iterators.FirstNIterator.class - [JAR]

├─ org.campagnelab.dl.somatic.learning.iterators.MultiDataSetRecordIterator.class - [JAR]

├─ org.campagnelab.dl.somatic.learning.iterators.NamedCachingDataSetIterator.class - [JAR]

├─ org.campagnelab.dl.somatic.learning.iterators.NamedDataSetIterator.class - [JAR]

├─ org.campagnelab.dl.somatic.learning.iterators.SBIRecordIterator.class - [JAR]

├─ org.campagnelab.dl.somatic.learning.iterators.SamplingDataset.class - [JAR]

├─ org.campagnelab.dl.somatic.learning.iterators.SamplingIterator.class - [JAR]

org.campagnelab.dl.somatic.mappers

├─ org.campagnelab.dl.somatic.mappers.AbstractFeatureMapper.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.BamFlagMapper.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.BinaryFeatureMapper.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.CategoryFeatureMapper.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.DensityMapper.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.DensityMapperCapped.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.FeatureMapperFT.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.FeatureMapperV10.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.FeatureMapperV11.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.FeatureMapperV12.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.FeatureMapperV13.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.FeatureMapperV14.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.FeatureMapperV15.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.FeatureMapperV16.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.FeatureMapperV17.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.FeatureMapperV18.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.FeatureMapperV19.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.FeatureMapperV2.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.FeatureMapperV20.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.FeatureMapperV21.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.FeatureMapperV22.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.FeatureMapperV23.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.FeatureMapperV24.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.FeatureMapperV25.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.FeatureMapperV3.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.FeatureMapperV3S.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.FeatureMapperV3SOld.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.FeatureMapperV4.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.FeatureMapperV5.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.FeatureMapperV6.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.FeatureMapperV7.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.FeatureMapperV8.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.FeatureMapperV9.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.FeatureMapperV9_2.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.FeatureMapperVT.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.FlipSamplesFeatureMapper.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.FractionDifferences.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.FractionDifferences2.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.FractionDifferences3.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.FractionDifferences4.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.FractionGenotypeCount.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.GenomicContextMapper.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.GenomicPositionDiscreteMapper.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.GenomicPositionMapper.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.GenotypeCount.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.IndelFeatures.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.IndelGenotypeCount.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.IsBaseMutatedMapper.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.IsSomaticMutationMapper.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.MagnitudeFeatures.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.MagnitudeFeatures2.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.MagnitudeFeatures3.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.MappingFunctions.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.NamingConcatFeatureMapper.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.NoMasksLabelMapper.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.PositiveControlFeatureMapper.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.QualityFeatures.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.QualityGenotypeCount.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.ReadIndexFeatures.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.ReadIndexFeaturesFix.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.ReadIndexWithCounts.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.SimpleFeatureCalculator.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.SomaticFrequencyLabelMapper.class - [JAR]

├─ org.campagnelab.dl.somatic.mappers.SortedGenotypeAgreementMapper.class - [JAR]

org.campagnelab.dl.somatic.learning

├─ org.campagnelab.dl.somatic.learning.AUCLossCalculator.class - [JAR]

├─ org.campagnelab.dl.somatic.learning.AbstractPredictMutations.class - [JAR]

├─ org.campagnelab.dl.somatic.learning.PredictMutations.class - [JAR]

├─ org.campagnelab.dl.somatic.learning.PredictionArguments.class - [JAR]

├─ org.campagnelab.dl.somatic.learning.SomaticTrainer.class - [JAR]

├─ org.campagnelab.dl.somatic.learning.SomaticTrainingArguments.class - [JAR]

├─ org.campagnelab.dl.somatic.learning.TrainModelS.class - [JAR]

├─ org.campagnelab.dl.somatic.learning.TrainSomaticModel.class - [JAR]

├─ org.campagnelab.dl.somatic.learning.TrainSomaticModelErrorSampling.class - [JAR]

org.campagnelab.dl : somatic

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Latest Version

All Versions

Download org.campagnelab.dl : somatic JAR file - All Versions:

View Java Class Source Code in JAR file