View Java Class Source Code in JAR file
- Download JD-GUI to open JAR file and explore Java source code file (.class .java)
- Click menu "File → Open File..." or just drag-and-drop the JAR file in the JD-GUI window goby-io-3.3.1.jar file.
Once you open a JAR file, all the java classes in the JAR file will be displayed.
org.campagnelab.dl.varanalysis.protobuf
├─ org.campagnelab.dl.varanalysis.protobuf.BaseInformationRecords.class - [JAR]
├─ org.campagnelab.dl.varanalysis.protobuf.SegmentInformationRecords.class - [JAR]
org.campagnelab.goby.modes.core
├─ org.campagnelab.goby.modes.core.TabToColumnInfoModeCore.class - [JAR]
├─ org.campagnelab.goby.modes.core.UpgradeModeCore.class - [JAR]
org.campagnelab.goby.readers
├─ org.campagnelab.goby.readers.FastXEntry.class - [JAR]
├─ org.campagnelab.goby.readers.FastXReader.class - [JAR]
org.campagnelab.goby.counts
├─ org.campagnelab.goby.counts.AnyTransitionCountsIterator.class - [JAR]
├─ org.campagnelab.goby.counts.CachingCountsArchiveReader.class - [JAR]
├─ org.campagnelab.goby.counts.CountAdaptiveBinningAdaptor.class - [JAR]
├─ org.campagnelab.goby.counts.CountBinningAdapterI.class - [JAR]
├─ org.campagnelab.goby.counts.CountBinningAdaptor.class - [JAR]
├─ org.campagnelab.goby.counts.CountIndexBuilder.class - [JAR]
├─ org.campagnelab.goby.counts.CountWriterHelper.class - [JAR]
├─ org.campagnelab.goby.counts.CountWriterHelper2.class - [JAR]
├─ org.campagnelab.goby.counts.CountsAggregatorI.class - [JAR]
├─ org.campagnelab.goby.counts.CountsArchiveReader.class - [JAR]
├─ org.campagnelab.goby.counts.CountsArchiveWriter.class - [JAR]
├─ org.campagnelab.goby.counts.CountsReader.class - [JAR]
├─ org.campagnelab.goby.counts.CountsReaderI.class - [JAR]
├─ org.campagnelab.goby.counts.CountsWriter.class - [JAR]
├─ org.campagnelab.goby.counts.CountsWriterHelperI.class - [JAR]
├─ org.campagnelab.goby.counts.CountsWriterI.class - [JAR]
├─ org.campagnelab.goby.counts.OffsetCountsReader.class - [JAR]
├─ org.campagnelab.goby.counts.Peak.class - [JAR]
├─ org.campagnelab.goby.counts.PeakAggregator.class - [JAR]
├─ org.campagnelab.goby.counts.PositionAdapter.class - [JAR]
├─ org.campagnelab.goby.counts.UnionAlgorithmSkeleton.class - [JAR]
├─ org.campagnelab.goby.counts.UnionDumpIterator.class - [JAR]
├─ org.campagnelab.goby.counts.WiggleWindow.class - [JAR]
org.campagnelab.goby
├─ org.campagnelab.goby.GobyVersion.class - [JAR]
org.campagnelab.goby.util.dynoptions
├─ org.campagnelab.goby.util.dynoptions.DynamicOptionClient.class - [JAR]
├─ org.campagnelab.goby.util.dynoptions.DynamicOptionRegistry.class - [JAR]
├─ org.campagnelab.goby.util.dynoptions.RegisterThis.class - [JAR]
org.campagnelab.goby.algorithmic.algorithm
├─ org.campagnelab.goby.algorithmic.algorithm.EquivalentIndelRegionCalculator.class - [JAR]
org.campagnelab.goby.reads
├─ org.campagnelab.goby.reads.CompressedRead.class - [JAR]
├─ org.campagnelab.goby.reads.DualRandomAccessSequenceCache.class - [JAR]
├─ org.campagnelab.goby.reads.MultiReads.class - [JAR]
├─ org.campagnelab.goby.reads.PicardFastaIndexedSequence.class - [JAR]
├─ org.campagnelab.goby.reads.QualityEncoding.class - [JAR]
├─ org.campagnelab.goby.reads.RandomAccessSequenceCache.class - [JAR]
├─ org.campagnelab.goby.reads.RandomAccessSequenceInterface.class - [JAR]
├─ org.campagnelab.goby.reads.RandomAccessSequenceTestSupport.class - [JAR]
├─ org.campagnelab.goby.reads.ReadCodec.class - [JAR]
├─ org.campagnelab.goby.reads.ReadCodec2.class - [JAR]
├─ org.campagnelab.goby.reads.ReadCodecImpl.class - [JAR]
├─ org.campagnelab.goby.reads.ReadProtobuffCollectionHandler.class - [JAR]
├─ org.campagnelab.goby.reads.ReadSet.class - [JAR]
├─ org.campagnelab.goby.reads.Reads.class - [JAR]
├─ org.campagnelab.goby.reads.ReadsLoader.class - [JAR]
├─ org.campagnelab.goby.reads.ReadsReader.class - [JAR]
├─ org.campagnelab.goby.reads.ReadsToTextWriter.class - [JAR]
├─ org.campagnelab.goby.reads.ReadsWriter.class - [JAR]
├─ org.campagnelab.goby.reads.ReadsWriterImpl.class - [JAR]
├─ org.campagnelab.goby.reads.SequenceDigests.class - [JAR]
├─ org.campagnelab.goby.reads.SequenceEncoder.class - [JAR]
org.campagnelab.goby.util.barcode
├─ org.campagnelab.goby.util.barcode.BarcodeMatcher.class - [JAR]
├─ org.campagnelab.goby.util.barcode.BarcodeMatcherResult.class - [JAR]
├─ org.campagnelab.goby.util.barcode.OverlapResult.class - [JAR]
├─ org.campagnelab.goby.util.barcode.PostBarcodeMatcher.class - [JAR]
├─ org.campagnelab.goby.util.barcode.PreBarcodeMatcher.class - [JAR]
org.campagnelab.goby.predictions
├─ org.campagnelab.goby.predictions.AddTrueGenotypeHelperI.class - [JAR]
├─ org.campagnelab.goby.predictions.DummyTrueGenotypeHelper.class - [JAR]
├─ org.campagnelab.goby.predictions.FormatIndelVCF.class - [JAR]
├─ org.campagnelab.goby.predictions.FormatIndelVCF2.class - [JAR]
├─ org.campagnelab.goby.predictions.FormatIndelVCF3.class - [JAR]
├─ org.campagnelab.goby.predictions.GenotypePredictor.class - [JAR]
├─ org.campagnelab.goby.predictions.MergeIndelFrom.class - [JAR]
├─ org.campagnelab.goby.predictions.Predictor.class - [JAR]
├─ org.campagnelab.goby.predictions.ProtoHelper.class - [JAR]
├─ org.campagnelab.goby.predictions.SomaticPredictor.class - [JAR]
org.campagnelab.goby.alignments.filters
├─ org.campagnelab.goby.alignments.filters.AbstractAlignmentEntryFilter.class - [JAR]
├─ org.campagnelab.goby.alignments.filters.AlignmentQualityFilter.class - [JAR]
├─ org.campagnelab.goby.alignments.filters.BestScoreAmbiguityAlignmentFilter.class - [JAR]
├─ org.campagnelab.goby.alignments.filters.BestScoreOnlyAlignmentFilter.class - [JAR]
├─ org.campagnelab.goby.alignments.filters.GeneTranscriptRelationships.class - [JAR]
├─ org.campagnelab.goby.alignments.filters.TranscriptBestScoreAlignmentFilter.class - [JAR]
├─ org.campagnelab.goby.alignments.filters.TranscriptsAlignmentFilter.class - [JAR]
org.campagnelab.goby.algorithmic.indels
├─ org.campagnelab.goby.algorithmic.indels.EquivalentIndelRegion.class - [JAR]
org.campagnelab.goby.exception
├─ org.campagnelab.goby.exception.GobyException.class - [JAR]
├─ org.campagnelab.goby.exception.GobyRuntimeException.class - [JAR]
org.campagnelab.goby.util.pool
├─ org.campagnelab.goby.util.pool.NullResettableObjectPool.class - [JAR]
├─ org.campagnelab.goby.util.pool.QueueResettableObjectPool.class - [JAR]
├─ org.campagnelab.goby.util.pool.Resettable.class - [JAR]
├─ org.campagnelab.goby.util.pool.ResettableObjectPoolInterface.class - [JAR]
org.campagnelab.goby.util.motifs
├─ org.campagnelab.goby.util.motifs.MotifMatcher.class - [JAR]
├─ org.campagnelab.goby.util.motifs.SubSequenceMotifMatcher.class - [JAR]
org.campagnelab.goby.alignments.htsjdk
├─ org.campagnelab.goby.alignments.htsjdk.HTSJDKReaderImpl.class - [JAR]
org.campagnelab.goby.util
├─ org.campagnelab.goby.util.AlignmentHelper.class - [JAR]
├─ org.campagnelab.goby.util.BaseToStringHelper.class - [JAR]
├─ org.campagnelab.goby.util.CodecHelper.class - [JAR]
├─ org.campagnelab.goby.util.FileExtensionHelper.class - [JAR]
├─ org.campagnelab.goby.util.FromToFreq.class - [JAR]
├─ org.campagnelab.goby.util.GenomeDebugHelper.class - [JAR]
├─ org.campagnelab.goby.util.GrepReader.class - [JAR]
├─ org.campagnelab.goby.util.HeaderUtil.class - [JAR]
├─ org.campagnelab.goby.util.IOUtil.class - [JAR]
├─ org.campagnelab.goby.util.IsDone.class - [JAR]
├─ org.campagnelab.goby.util.KnownIndelSet.class - [JAR]
├─ org.campagnelab.goby.util.LogIsConfigured.class - [JAR]
├─ org.campagnelab.goby.util.LoggingOutputStream.class - [JAR]
├─ org.campagnelab.goby.util.LongNamedCounter.class - [JAR]
├─ org.campagnelab.goby.util.NamedCounters.class - [JAR]
├─ org.campagnelab.goby.util.OutputInfo.class - [JAR]
├─ org.campagnelab.goby.util.OutputInfoFromWriter.class - [JAR]
├─ org.campagnelab.goby.util.SamHelper.class - [JAR]
├─ org.campagnelab.goby.util.SamSequenceVariation.class - [JAR]
├─ org.campagnelab.goby.util.StreamSignal.class - [JAR]
├─ org.campagnelab.goby.util.Timer.class - [JAR]
├─ org.campagnelab.goby.util.UnboundedFifoPool.class - [JAR]
├─ org.campagnelab.goby.util.Variant.class - [JAR]
├─ org.campagnelab.goby.util.VariantMapCreator.class - [JAR]
├─ org.campagnelab.goby.util.VariantMapHelper.class - [JAR]
├─ org.campagnelab.goby.util.WarningCounter.class - [JAR]
org.campagnelab.goby.alignments.processors
├─ org.campagnelab.goby.alignments.processors.AlignmentProcessorFactory.class - [JAR]
├─ org.campagnelab.goby.alignments.processors.AlignmentProcessorInterface.class - [JAR]
├─ org.campagnelab.goby.alignments.processors.DefaultAlignmentProcessorFactory.class - [JAR]
├─ org.campagnelab.goby.alignments.processors.DummyGenomeAlignmentTargetMapper.class - [JAR]
├─ org.campagnelab.goby.alignments.processors.DummyProcessor.class - [JAR]
├─ org.campagnelab.goby.alignments.processors.DummyProcessorUnsorted.class - [JAR]
├─ org.campagnelab.goby.alignments.processors.GenomeAlignmentTargetMapper.class - [JAR]
├─ org.campagnelab.goby.alignments.processors.InfoForTarget.class - [JAR]
├─ org.campagnelab.goby.alignments.processors.LocalSortProcessor.class - [JAR]
├─ org.campagnelab.goby.alignments.processors.ObservedIndel.class - [JAR]
├─ org.campagnelab.goby.alignments.processors.RealignmentProcessor.class - [JAR]
├─ org.campagnelab.goby.alignments.processors.SkipToIterator.class - [JAR]
├─ org.campagnelab.goby.alignments.processors.SkipToListIterator.class - [JAR]
├─ org.campagnelab.goby.alignments.processors.SkipToSortedReader.class - [JAR]
org.campagnelab.goby.baseinfo
├─ org.campagnelab.goby.baseinfo.BasenameUtils.class - [JAR]
├─ org.campagnelab.goby.baseinfo.CommitPropertiesStatAccumulator.class - [JAR]
├─ org.campagnelab.goby.baseinfo.ConstantAccumulator.class - [JAR]
├─ org.campagnelab.goby.baseinfo.SequenceBaseInformationReader.class - [JAR]
├─ org.campagnelab.goby.baseinfo.SequenceBaseInformationWriter.class - [JAR]
├─ org.campagnelab.goby.baseinfo.SequenceSegmentInformationReader.class - [JAR]
├─ org.campagnelab.goby.baseinfo.SequenceSegmentInformationWriter.class - [JAR]
├─ org.campagnelab.goby.baseinfo.StatAccumulator.class - [JAR]
├─ org.campagnelab.goby.baseinfo.StatAccumulatorBaseQuality.class - [JAR]
├─ org.campagnelab.goby.baseinfo.StatAccumulatorDistanceToEndOfRead.class - [JAR]
├─ org.campagnelab.goby.baseinfo.StatAccumulatorDistanceToStartOfRead.class - [JAR]
├─ org.campagnelab.goby.baseinfo.StatAccumulatorDistancesToReadVariations.class - [JAR]
├─ org.campagnelab.goby.baseinfo.StatAccumulatorInsertSizes.class - [JAR]
├─ org.campagnelab.goby.baseinfo.StatAccumulatorNumVariationsInRead.class - [JAR]
├─ org.campagnelab.goby.baseinfo.StatAccumulatorPairFlags.class - [JAR]
├─ org.campagnelab.goby.baseinfo.StatAccumulatorQueryAlignedLength.class - [JAR]
├─ org.campagnelab.goby.baseinfo.StatAccumulatorQueryPosition.class - [JAR]
├─ org.campagnelab.goby.baseinfo.StatAccumulatorReadMappingQuality.class - [JAR]
├─ org.campagnelab.goby.baseinfo.StatAccumulatorTargetAlignedLength.class - [JAR]
org.campagnelab.goby.util.commits
├─ org.campagnelab.goby.util.commits.CommitPropertyHelper.class - [JAR]
org.campagnelab.goby.algorithmic.dsv
├─ org.campagnelab.goby.algorithmic.dsv.DiscoverVariantPositionData.class - [JAR]
├─ org.campagnelab.goby.algorithmic.dsv.SampleCountInfo.class - [JAR]
org.campagnelab.goby.readers.vcf
├─ org.campagnelab.goby.readers.vcf.ColumnField.class - [JAR]
├─ org.campagnelab.goby.readers.vcf.ColumnFields.class - [JAR]
├─ org.campagnelab.goby.readers.vcf.ColumnInfo.class - [JAR]
├─ org.campagnelab.goby.readers.vcf.ColumnMetaInfo.class - [JAR]
├─ org.campagnelab.goby.readers.vcf.ColumnType.class - [JAR]
├─ org.campagnelab.goby.readers.vcf.Columns.class - [JAR]
├─ org.campagnelab.goby.readers.vcf.GroupAssociations.class - [JAR]
├─ org.campagnelab.goby.readers.vcf.VCFParser.class - [JAR]
org.campagnelab.goby.parsers
├─ org.campagnelab.goby.parsers.FastaParser.class - [JAR]
├─ org.campagnelab.goby.parsers.ReaderFastaParser.class - [JAR]
org.campagnelab.goby.counts.compound
├─ org.campagnelab.goby.counts.compound.CompoundDataInput.class - [JAR]
├─ org.campagnelab.goby.counts.compound.CompoundDataOutput.class - [JAR]
├─ org.campagnelab.goby.counts.compound.CompoundDirectoryEntry.class - [JAR]
├─ org.campagnelab.goby.counts.compound.CompoundFileReader.class - [JAR]
├─ org.campagnelab.goby.counts.compound.CompoundFileTool.class - [JAR]
├─ org.campagnelab.goby.counts.compound.CompoundFileWriter.class - [JAR]
org.campagnelab.goby.readers.sam
├─ org.campagnelab.goby.readers.sam.ChromosomeMapper.class - [JAR]
├─ org.campagnelab.goby.readers.sam.ConversionConfig.class - [JAR]
├─ org.campagnelab.goby.readers.sam.ConvertSamBAMReadToGobyAlignment.class - [JAR]
├─ org.campagnelab.goby.readers.sam.GobyQuickSeqvar.class - [JAR]
├─ org.campagnelab.goby.readers.sam.GobySamRecord.class - [JAR]
├─ org.campagnelab.goby.readers.sam.GobySamSegment.class - [JAR]
├─ org.campagnelab.goby.readers.sam.SAMRecordIterable.class - [JAR]
├─ org.campagnelab.goby.readers.sam.SamComparison.class - [JAR]
├─ org.campagnelab.goby.readers.sam.SamComparisonInterface.class - [JAR]
├─ org.campagnelab.goby.readers.sam.SamPerPositionComparison.class - [JAR]
├─ org.campagnelab.goby.readers.sam.SamRecordParser.class - [JAR]
org.campagnelab.goby.alignments.perms
├─ org.campagnelab.goby.alignments.perms.ConcatenatePermutations.class - [JAR]
├─ org.campagnelab.goby.alignments.perms.NoOpPermutation.class - [JAR]
├─ org.campagnelab.goby.alignments.perms.NoOpPermutationReader.class - [JAR]
├─ org.campagnelab.goby.alignments.perms.PermutationReader.class - [JAR]
├─ org.campagnelab.goby.alignments.perms.PermutationReaderInterface.class - [JAR]
├─ org.campagnelab.goby.alignments.perms.PermutationWriter.class - [JAR]
├─ org.campagnelab.goby.alignments.perms.QueryIndexPermutation.class - [JAR]
├─ org.campagnelab.goby.alignments.perms.QueryIndexPermutationInterface.class - [JAR]
├─ org.campagnelab.goby.alignments.perms.ReadNameToIndex.class - [JAR]
org.campagnelab.goby.compression
├─ org.campagnelab.goby.compression.BZip2ChunkCodec.class - [JAR]
├─ org.campagnelab.goby.compression.ChunkCodec.class - [JAR]
├─ org.campagnelab.goby.compression.ChunkCodecHelper.class - [JAR]
├─ org.campagnelab.goby.compression.FastArithmeticCoder.class - [JAR]
├─ org.campagnelab.goby.compression.FastArithmeticCoderI.class - [JAR]
├─ org.campagnelab.goby.compression.FastArithmeticCoderOrder1.class - [JAR]
├─ org.campagnelab.goby.compression.FastArithmeticCoderPlus.class - [JAR]
├─ org.campagnelab.goby.compression.FastArithmeticDecoder.class - [JAR]
├─ org.campagnelab.goby.compression.FastArithmeticDecoderI.class - [JAR]
├─ org.campagnelab.goby.compression.FastArithmeticDecoderOrder1.class - [JAR]
├─ org.campagnelab.goby.compression.FastArithmeticDecoderPlus.class - [JAR]
├─ org.campagnelab.goby.compression.FastBufferedMessageChunksReader.class - [JAR]
├─ org.campagnelab.goby.compression.GZipChunkCodec.class - [JAR]
├─ org.campagnelab.goby.compression.GzipOutputStreamWithCustomLevel.class - [JAR]
├─ org.campagnelab.goby.compression.HybridChunkCodec1.class - [JAR]
├─ org.campagnelab.goby.compression.HybridChunkCodec2.class - [JAR]
├─ org.campagnelab.goby.compression.InvalidChecksumException.class - [JAR]
├─ org.campagnelab.goby.compression.MessageChunksReader.class - [JAR]
├─ org.campagnelab.goby.compression.MessageChunksWriter.class - [JAR]
├─ org.campagnelab.goby.compression.MoveToFrontCoder.class - [JAR]
├─ org.campagnelab.goby.compression.NotCompressedChunkCodec.class - [JAR]
├─ org.campagnelab.goby.compression.NullChunkCodec.class - [JAR]
├─ org.campagnelab.goby.compression.ProtobuffCollectionHandler.class - [JAR]
├─ org.campagnelab.goby.compression.SequenceBaseInfoCollectionHandler.class - [JAR]
├─ org.campagnelab.goby.compression.SequenceSegmentInfoCollectionHandler.class - [JAR]
org.campagnelab.goby.alignments
├─ org.campagnelab.goby.alignments.AbstractAlignmentReader.class - [JAR]
├─ org.campagnelab.goby.alignments.AbstractConcatAlignmentReader.class - [JAR]
├─ org.campagnelab.goby.alignments.AlignedSequence.class - [JAR]
├─ org.campagnelab.goby.alignments.AlignmentCollectionHandler.class - [JAR]
├─ org.campagnelab.goby.alignments.AlignmentPositionComparator.class - [JAR]
├─ org.campagnelab.goby.alignments.AlignmentReader.class - [JAR]
├─ org.campagnelab.goby.alignments.AlignmentReaderFactory.class - [JAR]
├─ org.campagnelab.goby.alignments.AlignmentReaderFactoryBase.class - [JAR]
├─ org.campagnelab.goby.alignments.AlignmentReaderImpl.class - [JAR]
├─ org.campagnelab.goby.alignments.AlignmentSliceHelper.class - [JAR]
├─ org.campagnelab.goby.alignments.AlignmentStats.class - [JAR]
├─ org.campagnelab.goby.alignments.AlignmentToTextWriter.class - [JAR]
├─ org.campagnelab.goby.alignments.AlignmentTooManyHitsReader.class - [JAR]
├─ org.campagnelab.goby.alignments.AlignmentTooManyHitsWriter.class - [JAR]
├─ org.campagnelab.goby.alignments.AlignmentWriter.class - [JAR]
├─ org.campagnelab.goby.alignments.AlignmentWriterImpl.class - [JAR]
├─ org.campagnelab.goby.alignments.Alignments.class - [JAR]
├─ org.campagnelab.goby.alignments.BufferedSortingAlignmentWriter.class - [JAR]
├─ org.campagnelab.goby.alignments.BufferedSortingSamBamWriter.class - [JAR]
├─ org.campagnelab.goby.alignments.ConcatAlignmentReader.class - [JAR]
├─ org.campagnelab.goby.alignments.ConcatSortedAlignmentReader.class - [JAR]
├─ org.campagnelab.goby.alignments.DefaultAlignmentReaderFactory.class - [JAR]
├─ org.campagnelab.goby.alignments.EntryFlagHelper.class - [JAR]
├─ org.campagnelab.goby.alignments.ExportableAlignmentEntryData.class - [JAR]
├─ org.campagnelab.goby.alignments.FileSlice.class - [JAR]
├─ org.campagnelab.goby.alignments.GenomicRange.class - [JAR]
├─ org.campagnelab.goby.alignments.GobyAlignmentReaderFactory.class - [JAR]
├─ org.campagnelab.goby.alignments.HTSJdkReaderFactory.class - [JAR]
├─ org.campagnelab.goby.alignments.IterateAlignments.class - [JAR]
├─ org.campagnelab.goby.alignments.IterateSortedAlignments.class - [JAR]
├─ org.campagnelab.goby.alignments.IterateSortedAlignmentsListImpl2.class - [JAR]
├─ org.campagnelab.goby.alignments.LastParser.class - [JAR]
├─ org.campagnelab.goby.alignments.LinkInfo.class - [JAR]
├─ org.campagnelab.goby.alignments.Merge.class - [JAR]
├─ org.campagnelab.goby.alignments.NoUpgradeAlignmentReaderFactory.class - [JAR]
├─ org.campagnelab.goby.alignments.NonAmbiguousAlignmentReader.class - [JAR]
├─ org.campagnelab.goby.alignments.NonAmbiguousAlignmentReaderFactory.class - [JAR]
├─ org.campagnelab.goby.alignments.PositionBaseInfo.class - [JAR]
├─ org.campagnelab.goby.alignments.PositionFacadeAlignmentReader.class - [JAR]
├─ org.campagnelab.goby.alignments.PositionToBasesMap.class - [JAR]
├─ org.campagnelab.goby.alignments.ReadGroupHelper.class - [JAR]
├─ org.campagnelab.goby.alignments.ReadIndexStats.class - [JAR]
├─ org.campagnelab.goby.alignments.ReadOriginInfo.class - [JAR]
├─ org.campagnelab.goby.alignments.ReferenceLocation.class - [JAR]
├─ org.campagnelab.goby.alignments.RepositionableInputStream.class - [JAR]
├─ org.campagnelab.goby.alignments.SamRecordGenomicPositionComparator.class - [JAR]
├─ org.campagnelab.goby.alignments.ScanReferenceSequence.class - [JAR]
├─ org.campagnelab.goby.alignments.SortIterateAlignments.class - [JAR]
├─ org.campagnelab.goby.alignments.UpgradeTo1_9_6.class - [JAR]
