View Java Class Source Code in JAR file
- Download JD-GUI to open JAR file and explore Java source code file (.class .java)
- Click menu "File → Open File..." or just drag-and-drop the JAR file in the JD-GUI window mlrules-2.2.13-headless.jar file.
Once you open a JAR file, all the java classes in the JAR file will be displayed.
org.jamesii.mlrules.parser.functions
├─ org.jamesii.mlrules.parser.functions.Function.class - [JAR]
├─ org.jamesii.mlrules.parser.functions.FunctionDefinition.class - [JAR]
├─ org.jamesii.mlrules.parser.functions.PredefinedFunctions.class - [JAR]
org.jamesii.mlrules.experiment
├─ org.jamesii.mlrules.experiment.Experiment.class - [JAR]
├─ org.jamesii.mlrules.experiment.Job.class - [JAR]
├─ org.jamesii.mlrules.experiment.SimpleJob.class - [JAR]
├─ org.jamesii.mlrules.experiment.SimulationRun.class - [JAR]
org.jamesii.mlrules.parser.grammar
├─ org.jamesii.mlrules.parser.grammar.MLRulesBaseVisitor.class - [JAR]
├─ org.jamesii.mlrules.parser.grammar.MLRulesLexer.class - [JAR]
├─ org.jamesii.mlrules.parser.grammar.MLRulesParser.class - [JAR]
├─ org.jamesii.mlrules.parser.grammar.MLRulesVisitor.class - [JAR]
org.jamesii.mlrules.util.expressions
├─ org.jamesii.mlrules.util.expressions.SimpleRateExpressionOneSpecies.class - [JAR]
├─ org.jamesii.mlrules.util.expressions.SimpleRateExpressionTwoSpecies.class - [JAR]
├─ org.jamesii.mlrules.util.expressions.SimpleRateExpressions.class - [JAR]
org.jamesii.mlrules.parser.visitor.modelcreator
├─ org.jamesii.mlrules.parser.visitor.modelcreator.MLRulesModelCreater.class - [JAR]
├─ org.jamesii.mlrules.parser.visitor.modelcreator.StandardMLRulesVisitor.class - [JAR]
org.jamesii.steadystate.estimator.schruben
├─ org.jamesii.steadystate.estimator.schruben.SchrubensSteadyStateEstimator.class - [JAR]
org.jamesii.core.data.runtime
├─ org.jamesii.core.data.runtime.CSVFormatException.class - [JAR]
├─ org.jamesii.core.data.runtime.CSVFormatter.class - [JAR]
org.jamesii.mlrules.model
├─ org.jamesii.mlrules.model.Model.class - [JAR]
org.jamesii.core.math.random.generators.java
├─ org.jamesii.core.math.random.generators.java.JavaRandom.class - [JAR]
org.jamesii.mlrules.parser.exception
├─ org.jamesii.mlrules.parser.exception.DelayedEvaluationException.class - [JAR]
├─ org.jamesii.mlrules.parser.exception.SemanticsException.class - [JAR]
org.jamesii.mlrules.debug.experiment
├─ org.jamesii.mlrules.debug.experiment.CompilationExperiment.class - [JAR]
├─ org.jamesii.mlrules.debug.experiment.ExpInstrumenter.class - [JAR]
├─ org.jamesii.mlrules.debug.experiment.HybridExperiment.class - [JAR]
├─ org.jamesii.mlrules.debug.experiment.SampleExperiment.class - [JAR]
├─ org.jamesii.mlrules.debug.experiment.SpeciesCountExperiment.class - [JAR]
├─ org.jamesii.mlrules.debug.experiment.SpeciesCountInstrumenter.class - [JAR]
org.jamesii.mlrules.simulator.tauleaping
├─ org.jamesii.mlrules.simulator.tauleaping.NoReactionSelectedException.class - [JAR]
├─ org.jamesii.mlrules.simulator.tauleaping.TauComputation.class - [JAR]
├─ org.jamesii.mlrules.simulator.tauleaping.TauLeapingSimulator.class - [JAR]
├─ org.jamesii.mlrules.simulator.tauleaping.TauReaction.class - [JAR]
org.jamesii.mlrules.parser.nodes
├─ org.jamesii.mlrules.parser.nodes.AllBooleanCombinations.class - [JAR]
├─ org.jamesii.mlrules.parser.nodes.CosNode.class - [JAR]
├─ org.jamesii.mlrules.parser.nodes.DistanceNode.class - [JAR]
├─ org.jamesii.mlrules.parser.nodes.EmptyNode.class - [JAR]
├─ org.jamesii.mlrules.parser.nodes.EmptySolutionNode.class - [JAR]
├─ org.jamesii.mlrules.parser.nodes.FunctionCallNode.class - [JAR]
├─ org.jamesii.mlrules.parser.nodes.LogNode.class - [JAR]
├─ org.jamesii.mlrules.parser.nodes.MLRulesAddNode.class - [JAR]
├─ org.jamesii.mlrules.parser.nodes.NewSpeciesNode.class - [JAR]
├─ org.jamesii.mlrules.parser.nodes.NormNode.class - [JAR]
├─ org.jamesii.mlrules.parser.nodes.NuNode.class - [JAR]
├─ org.jamesii.mlrules.parser.nodes.RoundNode.class - [JAR]
├─ org.jamesii.mlrules.parser.nodes.SinNode.class - [JAR]
├─ org.jamesii.mlrules.parser.nodes.SolutionCountNode.class - [JAR]
├─ org.jamesii.mlrules.parser.nodes.SolutionCountOneAttributeNode.class - [JAR]
├─ org.jamesii.mlrules.parser.nodes.SolutionCountTwoAttributeNode.class - [JAR]
├─ org.jamesii.mlrules.parser.nodes.SolutionCountTwoAttributesNode.class - [JAR]
├─ org.jamesii.mlrules.parser.nodes.SolutionFilterNode.class - [JAR]
├─ org.jamesii.mlrules.parser.nodes.SpeciesAmountNode.class - [JAR]
├─ org.jamesii.mlrules.parser.nodes.SpeciesAttributeNode.class - [JAR]
├─ org.jamesii.mlrules.parser.nodes.SpeciesNameNode.class - [JAR]
├─ org.jamesii.mlrules.parser.nodes.SpeciesPatternNode.class - [JAR]
├─ org.jamesii.mlrules.parser.nodes.SpeciesSubNode.class - [JAR]
├─ org.jamesii.mlrules.parser.nodes.ToIntNode.class - [JAR]
├─ org.jamesii.mlrules.parser.nodes.TupleNode.class - [JAR]
├─ org.jamesii.mlrules.parser.nodes.UnifNode.class - [JAR]
org.jamesii.mlrules.experiment.stop
├─ org.jamesii.mlrules.experiment.stop.AbstractStopCondition.class - [JAR]
├─ org.jamesii.mlrules.experiment.stop.AndStopCondition.class - [JAR]
├─ org.jamesii.mlrules.experiment.stop.AndStopConditionFactory.class - [JAR]
├─ org.jamesii.mlrules.experiment.stop.OrStopCondition.class - [JAR]
├─ org.jamesii.mlrules.experiment.stop.OrStopConditionFactory.class - [JAR]
├─ org.jamesii.mlrules.experiment.stop.SchrubensSteadyStateCondition.class - [JAR]
├─ org.jamesii.mlrules.experiment.stop.SchrubensSteadyStateConditionFactory.class - [JAR]
├─ org.jamesii.mlrules.experiment.stop.SimTimeStopCondition.class - [JAR]
├─ org.jamesii.mlrules.experiment.stop.SimTimeStopConditionFactory.class - [JAR]
├─ org.jamesii.mlrules.experiment.stop.StopCondition.class - [JAR]
├─ org.jamesii.mlrules.experiment.stop.StopConditionFactory.class - [JAR]
├─ org.jamesii.mlrules.experiment.stop.WallClockStopCondition.class - [JAR]
├─ org.jamesii.mlrules.experiment.stop.WallClockStopConditionFactory.class - [JAR]
org.jamesii.mlrules.simulator
├─ org.jamesii.mlrules.simulator.Simulator.class - [JAR]
org.jamesii.mlrules.simulator.standard
├─ org.jamesii.mlrules.simulator.standard.AbstractReactionCreator.class - [JAR]
├─ org.jamesii.mlrules.simulator.standard.ChangedSpecies.class - [JAR]
├─ org.jamesii.mlrules.simulator.standard.ContextMatchings.class - [JAR]
├─ org.jamesii.mlrules.simulator.standard.Matching.class - [JAR]
├─ org.jamesii.mlrules.simulator.standard.Reaction.class - [JAR]
├─ org.jamesii.mlrules.simulator.standard.ReactionCreator.class - [JAR]
├─ org.jamesii.mlrules.simulator.standard.StandardSimulator.class - [JAR]
org.jamesii.core.math.random.generators
├─ org.jamesii.core.math.random.generators.AbstractRandom.class - [JAR]
├─ org.jamesii.core.math.random.generators.IRandom.class - [JAR]
├─ org.jamesii.core.math.random.generators.RNGInfo.class - [JAR]
├─ org.jamesii.core.math.random.generators.RNGPeriod.class - [JAR]
org.jamesii.core.math.parsetree.math
├─ org.jamesii.core.math.parsetree.math.AddNode.class - [JAR]
├─ org.jamesii.core.math.parsetree.math.DivNode.class - [JAR]
├─ org.jamesii.core.math.parsetree.math.IMathNode.class - [JAR]
├─ org.jamesii.core.math.parsetree.math.MinusNode.class - [JAR]
├─ org.jamesii.core.math.parsetree.math.MultNode.class - [JAR]
├─ org.jamesii.core.math.parsetree.math.PowerNode.class - [JAR]
org.jamesii.mlrules.experiment.thread
├─ org.jamesii.mlrules.experiment.thread.ThrowingRunnable.class - [JAR]
org.jamesii.core.math.parsetree.lists
├─ org.jamesii.core.math.parsetree.lists.ListNode.class - [JAR]
org.jamesii.mlrules.simulator.hybrid
├─ org.jamesii.mlrules.simulator.hybrid.AdvancedHybridSimulator.class - [JAR]
├─ org.jamesii.mlrules.simulator.hybrid.HybridSimulator.class - [JAR]
├─ org.jamesii.mlrules.simulator.hybrid.RejectException.class - [JAR]
org.jamesii.core.math.parsetree.control
├─ org.jamesii.core.math.parsetree.control.IfThenElseNode.class - [JAR]
org.jamesii.core.math.parsetree.bool
├─ org.jamesii.core.math.parsetree.bool.AndNode.class - [JAR]
├─ org.jamesii.core.math.parsetree.bool.IsEqualNode.class - [JAR]
├─ org.jamesii.core.math.parsetree.bool.IsGreaterNode.class - [JAR]
├─ org.jamesii.core.math.parsetree.bool.IsGreaterOrEqualNode.class - [JAR]
├─ org.jamesii.core.math.parsetree.bool.IsLowerNode.class - [JAR]
├─ org.jamesii.core.math.parsetree.bool.IsLowerOrEqualNode.class - [JAR]
├─ org.jamesii.core.math.parsetree.bool.IsNotEqualNode.class - [JAR]
├─ org.jamesii.core.math.parsetree.bool.NotNode.class - [JAR]
├─ org.jamesii.core.math.parsetree.bool.OrNode.class - [JAR]
org.jamesii.steadystate.estimator
├─ org.jamesii.steadystate.estimator.ISteadyStateEstimator.class - [JAR]
├─ org.jamesii.steadystate.estimator.SteadyStateEstimator.class - [JAR]
├─ org.jamesii.steadystate.estimator.SteadyStateEstimatorState.class - [JAR]
org.jamesii.mlrules.util.runtimeCompiling
├─ org.jamesii.mlrules.util.runtimeCompiling.CompileTools.class - [JAR]
├─ org.jamesii.mlrules.util.runtimeCompiling.DynamicNode.class - [JAR]
├─ org.jamesii.mlrules.util.runtimeCompiling.IDynamicNodeFactory.class - [JAR]
├─ org.jamesii.mlrules.util.runtimeCompiling.JavassistNodeFactory.class - [JAR]
org.jamesii.mlrules.simulator.links
├─ org.jamesii.mlrules.simulator.links.LinkModel.class - [JAR]
├─ org.jamesii.mlrules.simulator.links.LinkReactionCreator.class - [JAR]
├─ org.jamesii.mlrules.simulator.links.LinkSimulator.class - [JAR]
org.jamesii.mlrules.util
├─ org.jamesii.mlrules.util.Assignment.class - [JAR]
├─ org.jamesii.mlrules.util.DoubleNumber.class - [JAR]
├─ org.jamesii.mlrules.util.JCheckBoxTree.class - [JAR]
├─ org.jamesii.mlrules.util.LazyContextEvaluator.class - [JAR]
├─ org.jamesii.mlrules.util.LazyInitialization.class - [JAR]
├─ org.jamesii.mlrules.util.MLEnvironment.class - [JAR]
├─ org.jamesii.mlrules.util.NodeHelper.class - [JAR]
├─ org.jamesii.mlrules.util.Nu.class - [JAR]
├─ org.jamesii.mlrules.util.Pair.class - [JAR]
├─ org.jamesii.mlrules.util.RestSolution.class - [JAR]
├─ org.jamesii.mlrules.util.RestSolutionStatic.class - [JAR]
├─ org.jamesii.mlrules.util.TmpEnvironment.class - [JAR]
org.jamesii.core.math.parsetree.variables
├─ org.jamesii.core.math.parsetree.variables.Environment.class - [JAR]
├─ org.jamesii.core.math.parsetree.variables.IEnvironment.class - [JAR]
├─ org.jamesii.core.math.parsetree.variables.Identifier.class - [JAR]
org.jamesii.mlrules.parser.functions.param
├─ org.jamesii.mlrules.parser.functions.param.EmptySolParameter.class - [JAR]
├─ org.jamesii.mlrules.parser.functions.param.Parameter.class - [JAR]
├─ org.jamesii.mlrules.parser.functions.param.SimpleParameter.class - [JAR]
├─ org.jamesii.mlrules.parser.functions.param.SolParameter.class - [JAR]
├─ org.jamesii.mlrules.parser.functions.param.SpeciesParameter.class - [JAR]
├─ org.jamesii.mlrules.parser.functions.param.TupleParameter.class - [JAR]
├─ org.jamesii.mlrules.parser.functions.param.ValueParameter.class - [JAR]
org.jamesii.core.math.parsetree
├─ org.jamesii.core.math.parsetree.BinaryNode.class - [JAR]
├─ org.jamesii.core.math.parsetree.INode.class - [JAR]
├─ org.jamesii.core.math.parsetree.Node.class - [JAR]
├─ org.jamesii.core.math.parsetree.ValueNode.class - [JAR]
org.jamesii.mlrules.model.rule
├─ org.jamesii.mlrules.model.rule.Reactant.class - [JAR]
├─ org.jamesii.mlrules.model.rule.Rule.class - [JAR]
├─ org.jamesii.mlrules.model.rule.RuleComparator.class - [JAR]
├─ org.jamesii.mlrules.model.rule.Rules.class - [JAR]
org.jamesii.core.math.statistics
├─ org.jamesii.core.math.statistics.BetaFunction.class - [JAR]
├─ org.jamesii.core.math.statistics.IncompleteGammaFunction.class - [JAR]
org.jamesii.core.util.misc
├─ org.jamesii.core.util.misc.Comparators.class - [JAR]
├─ org.jamesii.core.util.misc.Pair.class - [JAR]
├─ org.jamesii.core.util.misc.Quadruple.class - [JAR]
org.jamesii.core.math.statistics.univariate
├─ org.jamesii.core.math.statistics.univariate.GammaFunction.class - [JAR]
org.jamesii.mlrules.simulator.factory
├─ org.jamesii.mlrules.simulator.factory.AdvancedHybridSimulatorFactory.class - [JAR]
├─ org.jamesii.mlrules.simulator.factory.AdvancedStaticSimulatorFactory.class - [JAR]
├─ org.jamesii.mlrules.simulator.factory.HybridSimulatorFactory.class - [JAR]
├─ org.jamesii.mlrules.simulator.factory.LinkSimulatorFactory.class - [JAR]
├─ org.jamesii.mlrules.simulator.factory.ModelNotSupportedException.class - [JAR]
├─ org.jamesii.mlrules.simulator.factory.SimpleSimulatorFactory.class - [JAR]
├─ org.jamesii.mlrules.simulator.factory.SimulatorFactory.class - [JAR]
├─ org.jamesii.mlrules.simulator.factory.StandardSimulatorFactory.class - [JAR]
├─ org.jamesii.mlrules.simulator.factory.TauLeapingSimulatorFactory.class - [JAR]
org.jamesii.mlrules.debug
├─ org.jamesii.mlrules.debug.DebugPrinter.class - [JAR]
├─ org.jamesii.mlrules.debug.Gamma.class - [JAR]
├─ org.jamesii.mlrules.debug.MyParserTest.class - [JAR]
org.jamesii.mlrules.observation.save
├─ org.jamesii.mlrules.observation.save.SaveAllListener.class - [JAR]
├─ org.jamesii.mlrules.observation.save.SaveAllListenerOneFile.class - [JAR]
org.jamesii.core.math.random.distributions
├─ org.jamesii.core.math.random.distributions.AbstractDistribution.class - [JAR]
├─ org.jamesii.core.math.random.distributions.AbstractNormalDistribution.class - [JAR]
├─ org.jamesii.core.math.random.distributions.ExponentialDistribution.class - [JAR]
├─ org.jamesii.core.math.random.distributions.IDistribution.class - [JAR]
├─ org.jamesii.core.math.random.distributions.NormalDistribution.class - [JAR]
├─ org.jamesii.core.math.random.distributions.PoissonDistribution.class - [JAR]
├─ org.jamesii.core.math.random.distributions.UniformDistribution.class - [JAR]
org.jamesii.mlrules.model.species
├─ org.jamesii.mlrules.model.species.Compartment.class - [JAR]
├─ org.jamesii.mlrules.model.species.LeafSpecies.class - [JAR]
├─ org.jamesii.mlrules.model.species.Species.class - [JAR]
├─ org.jamesii.mlrules.model.species.SpeciesType.class - [JAR]
org.jamesii.mlrules.simulator.simple
├─ org.jamesii.mlrules.simulator.simple.SimpleModel.class - [JAR]
├─ org.jamesii.mlrules.simulator.simple.SimpleReaction.class - [JAR]
├─ org.jamesii.mlrules.simulator.simple.SimpleReactionCreator.class - [JAR]
├─ org.jamesii.mlrules.simulator.simple.SimpleRule.class - [JAR]
├─ org.jamesii.mlrules.simulator.simple.SimpleSimulator.class - [JAR]
├─ org.jamesii.mlrules.simulator.simple.StaticRule.class - [JAR]
org.jamesii.mlrules.parser.visitor.typecheck.util
├─ org.jamesii.mlrules.parser.visitor.typecheck.util.TypeScope.class - [JAR]
├─ org.jamesii.mlrules.parser.visitor.typecheck.util.TypeSymbolTable.class - [JAR]
org.jamesii.mlrules.parser.types
├─ org.jamesii.mlrules.parser.types.BaseType.class - [JAR]
├─ org.jamesii.mlrules.parser.types.FunctionType.class - [JAR]
├─ org.jamesii.mlrules.parser.types.Primitives.class - [JAR]
├─ org.jamesii.mlrules.parser.types.Tuple.class - [JAR]
├─ org.jamesii.mlrules.parser.types.Type.class - [JAR]
org.jamesii.mlrules.parser.visitor.syntax
├─ org.jamesii.mlrules.parser.visitor.syntax.Styles.class - [JAR]
├─ org.jamesii.mlrules.parser.visitor.syntax.SyntaxCheckVisitor.class - [JAR]
├─ org.jamesii.mlrules.parser.visitor.syntax.SyntaxHighlightVisitor.class - [JAR]
├─ org.jamesii.mlrules.parser.visitor.syntax.VerboseErrorListener.class - [JAR]
org.jamesii.mlrules.model.rule.timed
├─ org.jamesii.mlrules.model.rule.timed.IntervalTimer.class - [JAR]
├─ org.jamesii.mlrules.model.rule.timed.SingleTimer.class - [JAR]
├─ org.jamesii.mlrules.model.rule.timed.TimedRule.class - [JAR]
├─ org.jamesii.mlrules.model.rule.timed.Timer.class - [JAR]
├─ org.jamesii.mlrules.model.rule.timed.TupleTimer.class - [JAR]
org.jamesii.mlrules.simulator.advancedstatic
├─ org.jamesii.mlrules.simulator.advancedstatic.AdvancedStaticSimulator.class - [JAR]
org.jamesii.mlrules.parser.visitor.typecheck
├─ org.jamesii.mlrules.parser.visitor.typecheck.TypeCheckVisitor.class - [JAR]
org.jamesii.mlrules.observation
├─ org.jamesii.mlrules.observation.AbstractStateTraversal.class - [JAR]
├─ org.jamesii.mlrules.observation.AttributeCollectionFunction.class - [JAR]
├─ org.jamesii.mlrules.observation.AttributeListener.class - [JAR]
├─ org.jamesii.mlrules.observation.Instrumenter.class - [JAR]
├─ org.jamesii.mlrules.observation.IntervalObserver.class - [JAR]
├─ org.jamesii.mlrules.observation.Listener.class - [JAR]
├─ org.jamesii.mlrules.observation.NeverObserver.class - [JAR]
├─ org.jamesii.mlrules.observation.Observer.class - [JAR]
├─ org.jamesii.mlrules.observation.SpeciesCountFunction.class - [JAR]
├─ org.jamesii.mlrules.observation.SpeciesCountListener.class - [JAR]
├─ org.jamesii.mlrules.observation.StateSaverListener.class - [JAR]
├─ org.jamesii.mlrules.observation.TimePointListObserver.class - [JAR]
├─ org.jamesii.mlrules.observation.TimeTriggeredObserver.class - [JAR]
org.jamesii.core.math.random.generators.mersennetwister
├─ org.jamesii.core.math.random.generators.mersennetwister.MersenneTwister.class - [JAR]
org.jamesii.steadystate.estimator.batchmean
├─ org.jamesii.steadystate.estimator.batchmean.BatchMeanSteadyStateEstimator.class - [JAR]
├─ org.jamesii.steadystate.estimator.batchmean.BatchMeanSteadyStateEstimatorState.class - [JAR]
org.jamesii.mlrules.parser.postprocessing
├─ org.jamesii.mlrules.parser.postprocessing.AbstractPostProcessor.class - [JAR]
├─ org.jamesii.mlrules.parser.postprocessing.RatePostProcessor.class - [JAR]
org.jamesii.core.math
├─ org.jamesii.core.math.Factorial.class - [JAR]
