jar

org.monarchinitiative.phenol : phenol-annotations

Maven & Gradle

Aug 01, 2023
1 usages
19 stars

phenol-annotations · phenol-annotation contains the annotation functionality for ontologies

Table Of Contents

Latest Version

Download org.monarchinitiative.phenol : phenol-annotations JAR file - Latest Versions:

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Download org.monarchinitiative.phenol : phenol-annotations JAR file - All Versions:

Version Vulnerabilities Size Updated
2.0.x
1.6.x
1.5.x
1.4.x

View Java Class Source Code in JAR file

  1. Download JD-GUI to open JAR file and explore Java source code file (.class .java)
  2. Click menu "File → Open File..." or just drag-and-drop the JAR file in the JD-GUI window phenol-annotations-2.0.3.jar file.
    Once you open a JAR file, all the java classes in the JAR file will be displayed.

org.monarchinitiative.phenol.annotations.hpo

├─ org.monarchinitiative.phenol.annotations.hpo.HpoAnnotationAlgorithms.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.hpo.HpoAnnotationEntry.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.hpo.HpoAnnotationFileIngestor.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.hpo.HpoAnnotationFileParser.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.hpo.HpoAnnotationModel.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.hpo.HpoAnnotationModelException.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.hpo.ObsoleteTermIdRuntimeException.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.hpo.OrphanetInheritanceXMLParser.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.hpo.OrphanetXML2HpoDiseaseModelParser.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.hpo.PhenotypeDotHpoaFileWriter.class - [JAR]

org.monarchinitiative.phenol.annotations.formats.mpo

├─ org.monarchinitiative.phenol.annotations.formats.mpo.MpAllelicComposition.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.mpo.MpAnnotation.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.mpo.MpGeneModel.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.mpo.MpGeneticMarker.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.mpo.MpMarkerType.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.mpo.MpModel.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.mpo.MpModifier.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.mpo.MpModifierType.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.mpo.MpSex.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.mpo.MpSimpleModel.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.mpo.MpStrain.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.mpo.MpoGeneAnnotation.class - [JAR]

org.monarchinitiative.phenol.annotations.analysis

├─ org.monarchinitiative.phenol.annotations.analysis.HpoOnsetDistribution.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.analysis.HpoOnsetDistributionSimple.class - [JAR]

org.monarchinitiative.phenol.annotations.base.temporal

├─ org.monarchinitiative.phenol.annotations.base.temporal.Age.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.base.temporal.AgeRange.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.base.temporal.AgeRangeDefault.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.base.temporal.Ages.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.base.temporal.ConfidenceRange.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.base.temporal.PointInTime.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.base.temporal.PointsInTime.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.base.temporal.TemporalInterval.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.base.temporal.TemporalIntervals.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.base.temporal.TemporalOverlapType.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.base.temporal.TimelineAware.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.base.temporal.Util.class - [JAR]

org.monarchinitiative.phenol.annotations.formats.hpo

├─ org.monarchinitiative.phenol.annotations.formats.hpo.AnnotatedItem.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.hpo.AnnotatedItemContainer.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.hpo.AnnotationFrequency.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.hpo.AnnotationFrequencyDefault.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.hpo.AssociationType.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.hpo.DiseaseToGeneAssociation.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.hpo.DiseaseToGeneAssociations.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.hpo.DiseaseToGeneAssociationsDefault.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.hpo.GeneToAssociation.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.hpo.HpoAssociationData.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.hpo.HpoAssociationDataBuilder.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.hpo.HpoAssociationDataDefault.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.hpo.HpoDisease.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.hpo.HpoDiseaseAnnotation.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.hpo.HpoDiseaseAnnotationRecord.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.hpo.HpoDiseaseAnnotationRecordDefault.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.hpo.HpoDiseaseDefault.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.hpo.HpoDiseases.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.hpo.HpoDiseasesDefault.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.hpo.HpoFrequency.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.hpo.HpoFrequencyTermIds.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.hpo.HpoGeneAnnotation.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.hpo.HpoGeneAnnotations.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.hpo.HpoGeneAnnotationsDefault.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.hpo.HpoModeOfInheritanceTermIds.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.hpo.HpoOnset.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.hpo.HpoOnsetTermIds.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.hpo.HpoSubOntologyRootTermIds.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.hpo.Utils.class - [JAR]

org.monarchinitiative.phenol.annotations.obo.mpo

├─ org.monarchinitiative.phenol.annotations.obo.mpo.MpAnnotationParser.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.obo.mpo.MpGeneParser.class - [JAR]

org.monarchinitiative.phenol.annotations.io.go

├─ org.monarchinitiative.phenol.annotations.io.go.GoGeneAnnotationParser.class - [JAR]

org.monarchinitiative.phenol.annotations.formats

├─ org.monarchinitiative.phenol.annotations.formats.AnnotationReference.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.EvidenceCode.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.GeneIdentifier.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.GeneIdentifiers.class - [JAR]

org.monarchinitiative.phenol.annotations.io.hpo

├─ org.monarchinitiative.phenol.annotations.io.hpo.Aspect.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.io.hpo.DiseaseDatabase.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.io.hpo.HpoAnnotationLine.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.io.hpo.HpoAnnotationLineOld.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.io.hpo.HpoDiseaseAnnotationParser.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.io.hpo.HpoDiseaseLoader.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.io.hpo.HpoDiseaseLoaderDefault.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.io.hpo.HpoDiseaseLoaderOptions.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.io.hpo.HpoDiseaseLoaders.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.io.hpo.HpoaDiseaseData.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.io.hpo.HpoaDiseaseDataContainer.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.io.hpo.HpoaDiseaseDataLoader.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.io.hpo.HpoaDiseaseDataLoaderDefault.class - [JAR]

org.monarchinitiative.phenol.annotations.formats.uberpheno

├─ org.monarchinitiative.phenol.annotations.formats.uberpheno.UberphenoGeneAnnotation.class - [JAR]

org.monarchinitiative.phenol.annotations.formats.hpo.category

├─ org.monarchinitiative.phenol.annotations.formats.hpo.category.HpoCategory.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.hpo.category.HpoCategoryMap.class - [JAR]

org.monarchinitiative.phenol.annotations.formats.go

├─ org.monarchinitiative.phenol.annotations.formats.go.GoGaf22Annotation.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.go.GoQualifier.class - [JAR]

org.monarchinitiative.phenol.annotations.base

├─ org.monarchinitiative.phenol.annotations.base.Ratio.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.base.RatioDefault.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.base.Sex.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.base.TermAnnotationParser.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.base.TermAnnotationParserException.class - [JAR]

org.monarchinitiative.phenol.annotations.formats.hpo.annotation_impl

├─ org.monarchinitiative.phenol.annotations.formats.hpo.annotation_impl.HpoDiseaseAnnotationRecordBacked.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.hpo.annotation_impl.RatioAndTemporalIntervalAware.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.hpo.annotation_impl.RatioAndTemporalIntervalAwareDefault.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.hpo.annotation_impl.TemporalRatios.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.formats.hpo.annotation_impl.TemporalRatiosNaive.class - [JAR]

org.monarchinitiative.phenol.annotations.assoc

├─ org.monarchinitiative.phenol.annotations.assoc.DiseaseToGeneAssociationLoader.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.assoc.FileUtils.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.assoc.GeneIdentifierLoader.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.assoc.GeneIdentifierLoaders.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.assoc.GeneInfoGeneType.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.assoc.HGNCGeneIdentifierLoader.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.assoc.HpoAssociationLoader.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.assoc.HumanGeneInfoLoader.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.assoc.Mim2GeneMedgenLoader.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.assoc.MissingPhenolResourceException.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.assoc.OrphaGeneToDiseaseParser.class - [JAR]

org.monarchinitiative.phenol.annotations.constants.hpo

├─ org.monarchinitiative.phenol.annotations.constants.hpo.HpoClinicalModifierTermIds.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.constants.hpo.HpoFrequencyTermIds.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.constants.hpo.HpoModeOfInheritanceTermIds.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.constants.hpo.HpoOnsetTermIds.class - [JAR]

├─ org.monarchinitiative.phenol.annotations.constants.hpo.HpoSubOntologyRootTermIds.class - [JAR]

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