jar

org.monarchinitiative.phenol : phenol-core

Maven & Gradle

Aug 01, 2023
4 usages
19 stars

phenol-core · phenol-core contains the core functionality for representing ontologies

Table Of Contents

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Download org.monarchinitiative.phenol : phenol-core JAR file - Latest Versions:

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Download org.monarchinitiative.phenol : phenol-core JAR file - All Versions:

Version Vulnerabilities Size Updated
2.0.x
1.6.x
1.5.x
1.4.x
1.3.x

View Java Class Source Code in JAR file

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org.monarchinitiative.phenol.ontology.scoredist

├─ org.monarchinitiative.phenol.ontology.scoredist.CannotMergeScoreDistributions.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.scoredist.ObjectScoreDistribution.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.scoredist.ScoreDistribution.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.scoredist.ScoreDistributions.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.scoredist.ScoreSamplingOptions.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.scoredist.SimilarityScoreSampling.class - [JAR]

org.monarchinitiative.phenol.ontology.serialize

├─ org.monarchinitiative.phenol.ontology.serialize.TermIdSerializer.class - [JAR]

org.monarchinitiative.phenol.ontology.data

├─ org.monarchinitiative.phenol.ontology.data.Dbxref.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.data.Identified.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.data.ImmutableOntology.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.data.MinimalOntology.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.data.Ontology.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.data.Relationship.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.data.RelationshipType.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.data.SimpleXref.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.data.SynonymType.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.data.Term.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.data.TermAnnotation.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.data.TermAnnotations.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.data.TermDefault.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.data.TermId.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.data.TermIds.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.data.TermMinimal.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.data.TermSynonym.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.data.TermSynonymScope.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.data.TermVisitor.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.data.TermXref.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.data.Versioned.class - [JAR]

org.monarchinitiative.phenol.base

├─ org.monarchinitiative.phenol.base.PhenolException.class - [JAR]

├─ org.monarchinitiative.phenol.base.PhenolRuntimeException.class - [JAR]

org.monarchinitiative.phenol.graph.exc

├─ org.monarchinitiative.phenol.graph.exc.GraphConstructionException.class - [JAR]

├─ org.monarchinitiative.phenol.graph.exc.GraphNotConnectedException.class - [JAR]

├─ org.monarchinitiative.phenol.graph.exc.GraphNotSimpleException.class - [JAR]

├─ org.monarchinitiative.phenol.graph.exc.VerticesAndEdgesIncompatibleException.class - [JAR]

org.monarchinitiative.phenol.utils

├─ org.monarchinitiative.phenol.utils.EagerSetOps.class - [JAR]

├─ org.monarchinitiative.phenol.utils.IterableIteratorWrapper.class - [JAR]

├─ org.monarchinitiative.phenol.utils.OntologyUtils.class - [JAR]

├─ org.monarchinitiative.phenol.utils.ProgressReporter.class - [JAR]

├─ org.monarchinitiative.phenol.utils.SetOps.class - [JAR]

├─ org.monarchinitiative.phenol.utils.Sets.class - [JAR]

org.monarchinitiative.phenol.ontology.algo

├─ org.monarchinitiative.phenol.ontology.algo.InformationContentComputation.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.algo.OntologyAlgorithm.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.algo.OntologyTerms.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.algo.ShortestPathTable.class - [JAR]

org.monarchinitiative.phenol.graph.algo

├─ org.monarchinitiative.phenol.graph.algo.AbstractGraphVertexStartFromVertexTraversal.class - [JAR]

├─ org.monarchinitiative.phenol.graph.algo.BreadthFirstSearch.class - [JAR]

├─ org.monarchinitiative.phenol.graph.algo.DepthFirstSearch.class - [JAR]

├─ org.monarchinitiative.phenol.graph.algo.ForwardNeighborSelector.class - [JAR]

├─ org.monarchinitiative.phenol.graph.algo.GraphNotDagException.class - [JAR]

├─ org.monarchinitiative.phenol.graph.algo.GraphVertexAllIteration.class - [JAR]

├─ org.monarchinitiative.phenol.graph.algo.NeighborSelector.class - [JAR]

├─ org.monarchinitiative.phenol.graph.algo.ReverseNeighborSelector.class - [JAR]

├─ org.monarchinitiative.phenol.graph.algo.TopologicalSorting.class - [JAR]

├─ org.monarchinitiative.phenol.graph.algo.VertexVisitor.class - [JAR]

org.monarchinitiative.phenol.graph

├─ org.monarchinitiative.phenol.graph.IdLabeledEdge.class - [JAR]

├─ org.monarchinitiative.phenol.graph.NodeNotPresentInGraphException.class - [JAR]

├─ org.monarchinitiative.phenol.graph.OntologyGraph.class - [JAR]

├─ org.monarchinitiative.phenol.graph.OntologyGraphBuilder.class - [JAR]

├─ org.monarchinitiative.phenol.graph.OntologyGraphBuilders.class - [JAR]

├─ org.monarchinitiative.phenol.graph.OntologyGraphEdge.class - [JAR]

├─ org.monarchinitiative.phenol.graph.OntologyGraphEdgeDefault.class - [JAR]

├─ org.monarchinitiative.phenol.graph.RelationType.class - [JAR]

├─ org.monarchinitiative.phenol.graph.RelationTypeDefault.class - [JAR]

├─ org.monarchinitiative.phenol.graph.RelationTypes.class - [JAR]

org.monarchinitiative.phenol.graph.csr

├─ org.monarchinitiative.phenol.graph.csr.CsrData.class - [JAR]

├─ org.monarchinitiative.phenol.graph.csr.CsrOntologyGraph.class - [JAR]

├─ org.monarchinitiative.phenol.graph.csr.CsrOntologyGraphBuilder.class - [JAR]

├─ org.monarchinitiative.phenol.graph.csr.CsrRowBuilder.class - [JAR]

├─ org.monarchinitiative.phenol.graph.csr.DataIndexer.class - [JAR]

├─ org.monarchinitiative.phenol.graph.csr.ImmutableCsrMatrix.class - [JAR]

├─ org.monarchinitiative.phenol.graph.csr.InfallibleMappingIterator.class - [JAR]

├─ org.monarchinitiative.phenol.graph.csr.InsufficientWidthException.class - [JAR]

├─ org.monarchinitiative.phenol.graph.csr.ItemsNotSortedException.class - [JAR]

├─ org.monarchinitiative.phenol.graph.csr.NodeIndexIterator.class - [JAR]

├─ org.monarchinitiative.phenol.graph.csr.RelationCodec.class - [JAR]

├─ org.monarchinitiative.phenol.graph.csr.RelationCodecDefault.class - [JAR]

├─ org.monarchinitiative.phenol.graph.csr.Util.class - [JAR]

org.monarchinitiative.phenol.graph.csr.indexer

├─ org.monarchinitiative.phenol.graph.csr.indexer.DataIndexerByte.class - [JAR]

├─ org.monarchinitiative.phenol.graph.csr.indexer.DataIndexerInteger.class - [JAR]

├─ org.monarchinitiative.phenol.graph.csr.indexer.DataIndexerLong.class - [JAR]

├─ org.monarchinitiative.phenol.graph.csr.indexer.DataIndexerShort.class - [JAR]

org.monarchinitiative.phenol.ontology.similarity

├─ org.monarchinitiative.phenol.ontology.similarity.AbstractCommonAncestorSimilarity.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.similarity.CosineSimilarity.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.similarity.HpoResnikSimilarity.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.similarity.JaccardSimilarity.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.similarity.PairwiseResnikSimilarity.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.similarity.PairwiseSimilarity.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.similarity.PrecomputingPairwiseResnikSimilarity.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.similarity.ResnikSimilarity.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.similarity.Similarity.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.similarity.SimpleFeatureVectorSimilarity.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.similarity.TermOverlapSimilarity.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.similarity.TermPair.class - [JAR]

org.monarchinitiative.phenol.graph.util

├─ org.monarchinitiative.phenol.graph.util.CompatibilityChecker.class - [JAR]

├─ org.monarchinitiative.phenol.graph.util.GraphUtil.class - [JAR]

org.monarchinitiative.phenol.ontology.data.impl

├─ org.monarchinitiative.phenol.ontology.data.impl.AllTermIdIterator.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.data.impl.AltTermIdIterator.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.data.impl.ArrayRelationshipContainer.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.data.impl.MapRelationshipContainer.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.data.impl.RelationshipContainer.class - [JAR]

├─ org.monarchinitiative.phenol.ontology.data.impl.SimpleMinimalOntology.class - [JAR]

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