View Java Class Source Code in JAR file
- Download JD-GUI to open JAR file and explore Java source code file (.class .java)
- Click menu "File → Open File..." or just drag-and-drop the JAR file in the JD-GUI window opencga-core-2.8.3.jar file.
Once you open a JAR file, all the java classes in the JAR file will be displayed.
org.opencb.opencga.core.models.variant
├─ org.opencb.opencga.core.models.variant.AnnotationVariantQueryParams.class - [JAR]
├─ org.opencb.opencga.core.models.variant.BasicVariantQueryParams.class - [JAR]
├─ org.opencb.opencga.core.models.variant.CircosAnalysisParams.class - [JAR]
├─ org.opencb.opencga.core.models.variant.CircosTrack.class - [JAR]
├─ org.opencb.opencga.core.models.variant.CohortVariantStatsAnalysisParams.class - [JAR]
├─ org.opencb.opencga.core.models.variant.FamilyQcAnalysisParams.class - [JAR]
├─ org.opencb.opencga.core.models.variant.GatkWrapperParams.class - [JAR]
├─ org.opencb.opencga.core.models.variant.GenomePlotAnalysisParams.class - [JAR]
├─ org.opencb.opencga.core.models.variant.GwasAnalysisParams.class - [JAR]
├─ org.opencb.opencga.core.models.variant.HRDetectAnalysisParams.class - [JAR]
├─ org.opencb.opencga.core.models.variant.HsMetricsReport.class - [JAR]
├─ org.opencb.opencga.core.models.variant.IndividualQcAnalysisParams.class - [JAR]
├─ org.opencb.opencga.core.models.variant.InferredSexAnalysisParams.class - [JAR]
├─ org.opencb.opencga.core.models.variant.KnockoutAnalysisParams.class - [JAR]
├─ org.opencb.opencga.core.models.variant.MendelianErrorAnalysisParams.class - [JAR]
├─ org.opencb.opencga.core.models.variant.MutationalSignatureAnalysisParams.class - [JAR]
├─ org.opencb.opencga.core.models.variant.PlinkWrapperParams.class - [JAR]
├─ org.opencb.opencga.core.models.variant.RelatednessAnalysisParams.class - [JAR]
├─ org.opencb.opencga.core.models.variant.RvtestsWrapperParams.class - [JAR]
├─ org.opencb.opencga.core.models.variant.SampleEligibilityAnalysisParams.class - [JAR]
├─ org.opencb.opencga.core.models.variant.SampleQcAnalysisParams.class - [JAR]
├─ org.opencb.opencga.core.models.variant.SampleQcSignatureQueryParams.class - [JAR]
├─ org.opencb.opencga.core.models.variant.SampleVariantFilterParams.class - [JAR]
├─ org.opencb.opencga.core.models.variant.SampleVariantStatsAnalysisParams.class - [JAR]
├─ org.opencb.opencga.core.models.variant.VariantAnnotationConstants.class - [JAR]
├─ org.opencb.opencga.core.models.variant.VariantConfigureParams.class - [JAR]
├─ org.opencb.opencga.core.models.variant.VariantExportParams.class - [JAR]
├─ org.opencb.opencga.core.models.variant.VariantFileDeleteParams.class - [JAR]
├─ org.opencb.opencga.core.models.variant.VariantFileIndexJobLauncherParams.class - [JAR]
├─ org.opencb.opencga.core.models.variant.VariantFileQualityControl.class - [JAR]
├─ org.opencb.opencga.core.models.variant.VariantIndexParams.class - [JAR]
├─ org.opencb.opencga.core.models.variant.VariantPruneParams.class - [JAR]
├─ org.opencb.opencga.core.models.variant.VariantQueryParams.class - [JAR]
├─ org.opencb.opencga.core.models.variant.VariantSampleDeleteParams.class - [JAR]
├─ org.opencb.opencga.core.models.variant.VariantStatsAnalysisParams.class - [JAR]
├─ org.opencb.opencga.core.models.variant.VariantStorageMetadataSynchronizeParams.class - [JAR]
├─ org.opencb.opencga.core.models.variant.VariantStudyDeleteParams.class - [JAR]
org.opencb.opencga.core.models.family
├─ org.opencb.opencga.core.models.family.Family.class - [JAR]
├─ org.opencb.opencga.core.models.family.FamilyAclEntryList.class - [JAR]
├─ org.opencb.opencga.core.models.family.FamilyAclParams.class - [JAR]
├─ org.opencb.opencga.core.models.family.FamilyAclUpdateParams.class - [JAR]
├─ org.opencb.opencga.core.models.family.FamilyCreateParams.class - [JAR]
├─ org.opencb.opencga.core.models.family.FamilyInternal.class - [JAR]
├─ org.opencb.opencga.core.models.family.FamilyMixin.class - [JAR]
├─ org.opencb.opencga.core.models.family.FamilyPermissions.class - [JAR]
├─ org.opencb.opencga.core.models.family.FamilyQualityControl.class - [JAR]
├─ org.opencb.opencga.core.models.family.FamilyStatus.class - [JAR]
├─ org.opencb.opencga.core.models.family.FamilyUpdateParams.class - [JAR]
├─ org.opencb.opencga.core.models.family.IndividualCreateParams.class - [JAR]
├─ org.opencb.opencga.core.models.family.PedigreeGraph.class - [JAR]
├─ org.opencb.opencga.core.models.family.PedigreeGraphAnalysisParams.class - [JAR]
org.opencb.opencga.core.api
├─ org.opencb.opencga.core.api.FieldConstants.class - [JAR]
├─ org.opencb.opencga.core.api.ParamConstants.class - [JAR]
org.opencb.opencga.core.cellbase
├─ org.opencb.opencga.core.cellbase.CellBaseValidator.class - [JAR]
org.opencb.opencga.core.models.panel
├─ org.opencb.opencga.core.models.panel.Panel.class - [JAR]
├─ org.opencb.opencga.core.models.panel.PanelAclEntryList.class - [JAR]
├─ org.opencb.opencga.core.models.panel.PanelAclUpdateParams.class - [JAR]
├─ org.opencb.opencga.core.models.panel.PanelCreateParams.class - [JAR]
├─ org.opencb.opencga.core.models.panel.PanelImportParams.class - [JAR]
├─ org.opencb.opencga.core.models.panel.PanelInternal.class - [JAR]
├─ org.opencb.opencga.core.models.panel.PanelMixin.class - [JAR]
├─ org.opencb.opencga.core.models.panel.PanelPermissions.class - [JAR]
├─ org.opencb.opencga.core.models.panel.PanelReferenceParam.class - [JAR]
├─ org.opencb.opencga.core.models.panel.PanelUnwrapMixin.class - [JAR]
├─ org.opencb.opencga.core.models.panel.PanelUpdateParams.class - [JAR]
org.opencb.opencga.core.models.common.mixins
├─ org.opencb.opencga.core.models.common.mixins.GenericRecordAvroJsonMixin.class - [JAR]
├─ org.opencb.opencga.core.models.common.mixins.GenotypeJsonMixin.class - [JAR]
├─ org.opencb.opencga.core.models.common.mixins.VariantStatsJsonMixin.class - [JAR]
org.opencb.opencga.core.models.study
├─ org.opencb.opencga.core.models.study.CustomGroup.class - [JAR]
├─ org.opencb.opencga.core.models.study.Group.class - [JAR]
├─ org.opencb.opencga.core.models.study.GroupCreateParams.class - [JAR]
├─ org.opencb.opencga.core.models.study.GroupUpdateParams.class - [JAR]
├─ org.opencb.opencga.core.models.study.PermissionRule.class - [JAR]
├─ org.opencb.opencga.core.models.study.RecessiveGeneSummaryIndex.class - [JAR]
├─ org.opencb.opencga.core.models.study.Study.class - [JAR]
├─ org.opencb.opencga.core.models.study.StudyAclEntryList.class - [JAR]
├─ org.opencb.opencga.core.models.study.StudyAclParams.class - [JAR]
├─ org.opencb.opencga.core.models.study.StudyAclUpdateParams.class - [JAR]
├─ org.opencb.opencga.core.models.study.StudyCreateParams.class - [JAR]
├─ org.opencb.opencga.core.models.study.StudyIndex.class - [JAR]
├─ org.opencb.opencga.core.models.study.StudyInternal.class - [JAR]
├─ org.opencb.opencga.core.models.study.StudyNotification.class - [JAR]
├─ org.opencb.opencga.core.models.study.StudyPermissions.class - [JAR]
├─ org.opencb.opencga.core.models.study.StudyType.class - [JAR]
├─ org.opencb.opencga.core.models.study.StudyUpdateParams.class - [JAR]
├─ org.opencb.opencga.core.models.study.StudyVariantEngineConfiguration.class - [JAR]
├─ org.opencb.opencga.core.models.study.TemplateParams.class - [JAR]
├─ org.opencb.opencga.core.models.study.Variable.class - [JAR]
├─ org.opencb.opencga.core.models.study.VariableMixin.class - [JAR]
├─ org.opencb.opencga.core.models.study.VariableSet.class - [JAR]
├─ org.opencb.opencga.core.models.study.VariableSetCreateParams.class - [JAR]
org.opencb.opencga.core.models.study.configuration
├─ org.opencb.opencga.core.models.study.configuration.ClinicalAnalysisStudyConfiguration.class - [JAR]
├─ org.opencb.opencga.core.models.study.configuration.ClinicalConsent.class - [JAR]
├─ org.opencb.opencga.core.models.study.configuration.ClinicalConsentAnnotation.class - [JAR]
├─ org.opencb.opencga.core.models.study.configuration.ClinicalConsentAnnotationParam.class - [JAR]
├─ org.opencb.opencga.core.models.study.configuration.ClinicalConsentConfiguration.class - [JAR]
├─ org.opencb.opencga.core.models.study.configuration.ClinicalConsentParam.class - [JAR]
├─ org.opencb.opencga.core.models.study.configuration.ClinicalPriorityAnnotation.class - [JAR]
├─ org.opencb.opencga.core.models.study.configuration.ClinicalPriorityValue.class - [JAR]
├─ org.opencb.opencga.core.models.study.configuration.InterpretationStudyConfiguration.class - [JAR]
├─ org.opencb.opencga.core.models.study.configuration.InterpretationVariantCallerConfiguration.class - [JAR]
├─ org.opencb.opencga.core.models.study.configuration.StudyConfiguration.class - [JAR]
├─ org.opencb.opencga.core.models.study.configuration.VariantInclusionQueryConfiguration.class - [JAR]
org.opencb.opencga.core.models.cohort
├─ org.opencb.opencga.core.models.cohort.Cohort.class - [JAR]
├─ org.opencb.opencga.core.models.cohort.CohortAclEntryList.class - [JAR]
├─ org.opencb.opencga.core.models.cohort.CohortAclUpdateParams.class - [JAR]
├─ org.opencb.opencga.core.models.cohort.CohortCreateParams.class - [JAR]
├─ org.opencb.opencga.core.models.cohort.CohortGenerateParams.class - [JAR]
├─ org.opencb.opencga.core.models.cohort.CohortInternal.class - [JAR]
├─ org.opencb.opencga.core.models.cohort.CohortPermissions.class - [JAR]
├─ org.opencb.opencga.core.models.cohort.CohortStatus.class - [JAR]
├─ org.opencb.opencga.core.models.cohort.CohortUpdateParams.class - [JAR]
org.opencb.opencga.core.tools.variant
├─ org.opencb.opencga.core.tools.variant.CircosAnalysisExecutor.class - [JAR]
├─ org.opencb.opencga.core.tools.variant.CohortVariantStatsAnalysisExecutor.class - [JAR]
├─ org.opencb.opencga.core.tools.variant.FamilyQcAnalysisExecutor.class - [JAR]
├─ org.opencb.opencga.core.tools.variant.GenomePlotAnalysisExecutor.class - [JAR]
├─ org.opencb.opencga.core.tools.variant.GwasAnalysisExecutor.class - [JAR]
├─ org.opencb.opencga.core.tools.variant.HRDetectAnalysisExecutor.class - [JAR]
├─ org.opencb.opencga.core.tools.variant.IBDRelatednessAnalysisExecutor.class - [JAR]
├─ org.opencb.opencga.core.tools.variant.IndividualQcAnalysisExecutor.class - [JAR]
├─ org.opencb.opencga.core.tools.variant.InferredSexAnalysisExecutor.class - [JAR]
├─ org.opencb.opencga.core.tools.variant.JulieToolExecutor.class - [JAR]
├─ org.opencb.opencga.core.tools.variant.MendelianErrorAnalysisExecutor.class - [JAR]
├─ org.opencb.opencga.core.tools.variant.MutationalSignatureAnalysisExecutor.class - [JAR]
├─ org.opencb.opencga.core.tools.variant.SampleQcAnalysisExecutor.class - [JAR]
├─ org.opencb.opencga.core.tools.variant.SampleVariantStatsAnalysisExecutor.class - [JAR]
├─ org.opencb.opencga.core.tools.variant.TdtAnalysisExecutor.class - [JAR]
├─ org.opencb.opencga.core.tools.variant.VariantStatsAnalysisExecutor.class - [JAR]
org.opencb.opencga.core.tools
├─ org.opencb.opencga.core.tools.OpenCgaToolExecutor.class - [JAR]
├─ org.opencb.opencga.core.tools.ToolParams.class - [JAR]
org.opencb.opencga.core.tools.alignment
├─ org.opencb.opencga.core.tools.alignment.AlignmentGeneCoverageStatsAnalysisExecutor.class - [JAR]
org.opencb.opencga.core.models.analysis.knockout
├─ org.opencb.opencga.core.models.analysis.knockout.IndividualKnockoutStats.class - [JAR]
├─ org.opencb.opencga.core.models.analysis.knockout.KnockoutByGene.class - [JAR]
├─ org.opencb.opencga.core.models.analysis.knockout.KnockoutByGeneSummary.class - [JAR]
├─ org.opencb.opencga.core.models.analysis.knockout.KnockoutByIndividual.class - [JAR]
├─ org.opencb.opencga.core.models.analysis.knockout.KnockoutByIndividualSummary.class - [JAR]
├─ org.opencb.opencga.core.models.analysis.knockout.KnockoutByVariant.class - [JAR]
├─ org.opencb.opencga.core.models.analysis.knockout.KnockoutByVariantSummary.class - [JAR]
├─ org.opencb.opencga.core.models.analysis.knockout.KnockoutStats.class - [JAR]
├─ org.opencb.opencga.core.models.analysis.knockout.KnockoutSummary.class - [JAR]
├─ org.opencb.opencga.core.models.analysis.knockout.KnockoutTranscript.class - [JAR]
├─ org.opencb.opencga.core.models.analysis.knockout.KnockoutVariant.class - [JAR]
├─ org.opencb.opencga.core.models.analysis.knockout.RgaKnockoutByGene.class - [JAR]
├─ org.opencb.opencga.core.models.analysis.knockout.VariantKnockoutStats.class - [JAR]
org.opencb.opencga.core.models.alignment
├─ org.opencb.opencga.core.models.alignment.AlignmentFastQcMetricsParams.class - [JAR]
├─ org.opencb.opencga.core.models.alignment.AlignmentFileQualityControl.class - [JAR]
├─ org.opencb.opencga.core.models.alignment.AlignmentFlagStatsParams.class - [JAR]
├─ org.opencb.opencga.core.models.alignment.AlignmentGeneCoverageStatsParams.class - [JAR]
├─ org.opencb.opencga.core.models.alignment.AlignmentHsMetricsParams.class - [JAR]
├─ org.opencb.opencga.core.models.alignment.AlignmentIndexParams.class - [JAR]
├─ org.opencb.opencga.core.models.alignment.AlignmentQcParams.class - [JAR]
├─ org.opencb.opencga.core.models.alignment.AlignmentStatsParams.class - [JAR]
├─ org.opencb.opencga.core.models.alignment.BwaWrapperParams.class - [JAR]
├─ org.opencb.opencga.core.models.alignment.CoverageFileQualityControl.class - [JAR]
├─ org.opencb.opencga.core.models.alignment.CoverageIndexParams.class - [JAR]
├─ org.opencb.opencga.core.models.alignment.DeeptoolsWrapperParams.class - [JAR]
├─ org.opencb.opencga.core.models.alignment.FastqcWrapperParams.class - [JAR]
├─ org.opencb.opencga.core.models.alignment.PicardWrapperParams.class - [JAR]
├─ org.opencb.opencga.core.models.alignment.SamtoolsWrapperParams.class - [JAR]
org.opencb.opencga.core.models.file
├─ org.opencb.opencga.core.models.file.File.class - [JAR]
├─ org.opencb.opencga.core.models.file.FileAclEntryList.class - [JAR]
├─ org.opencb.opencga.core.models.file.FileAclParams.class - [JAR]
├─ org.opencb.opencga.core.models.file.FileAclUpdateParams.class - [JAR]
├─ org.opencb.opencga.core.models.file.FileContent.class - [JAR]
├─ org.opencb.opencga.core.models.file.FileCreateParams.class - [JAR]
├─ org.opencb.opencga.core.models.file.FileCreateParamsOld.class - [JAR]
├─ org.opencb.opencga.core.models.file.FileExperiment.class - [JAR]
├─ org.opencb.opencga.core.models.file.FileFetch.class - [JAR]
├─ org.opencb.opencga.core.models.file.FileInternal.class - [JAR]
├─ org.opencb.opencga.core.models.file.FileInternalAlignment.class - [JAR]
├─ org.opencb.opencga.core.models.file.FileInternalAlignmentIndex.class - [JAR]
├─ org.opencb.opencga.core.models.file.FileInternalVariant.class - [JAR]
├─ org.opencb.opencga.core.models.file.FileInternalVariantAnnotationIndex.class - [JAR]
├─ org.opencb.opencga.core.models.file.FileInternalVariantIndex.class - [JAR]
├─ org.opencb.opencga.core.models.file.FileInternalVariantSecondaryAnnotationIndex.class - [JAR]
├─ org.opencb.opencga.core.models.file.FileLibraryExperiment.class - [JAR]
├─ org.opencb.opencga.core.models.file.FileLinkInternalParams.class - [JAR]
├─ org.opencb.opencga.core.models.file.FileLinkParams.class - [JAR]
├─ org.opencb.opencga.core.models.file.FileLinkToolParams.class - [JAR]
├─ org.opencb.opencga.core.models.file.FileMixin.class - [JAR]
├─ org.opencb.opencga.core.models.file.FilePermissions.class - [JAR]
├─ org.opencb.opencga.core.models.file.FileQualityControl.class - [JAR]
├─ org.opencb.opencga.core.models.file.FileReferenceParam.class - [JAR]
├─ org.opencb.opencga.core.models.file.FileRelatedFile.class - [JAR]
├─ org.opencb.opencga.core.models.file.FileStatus.class - [JAR]
├─ org.opencb.opencga.core.models.file.FileTree.class - [JAR]
├─ org.opencb.opencga.core.models.file.FileTreeBuilder.class - [JAR]
├─ org.opencb.opencga.core.models.file.FileUpdateParams.class - [JAR]
├─ org.opencb.opencga.core.models.file.MissingSamples.class - [JAR]
├─ org.opencb.opencga.core.models.file.PostLinkToolParams.class - [JAR]
├─ org.opencb.opencga.core.models.file.SmallFileInternal.class - [JAR]
├─ org.opencb.opencga.core.models.file.SmallRelatedFileParams.class - [JAR]
├─ org.opencb.opencga.core.models.file.VariantIndexStatus.class - [JAR]
org.opencb.opencga.core.models.operations.variant
├─ org.opencb.opencga.core.models.operations.variant.JulieParams.class - [JAR]
├─ org.opencb.opencga.core.models.operations.variant.VariantAggregateFamilyParams.class - [JAR]
├─ org.opencb.opencga.core.models.operations.variant.VariantAggregateParams.class - [JAR]
├─ org.opencb.opencga.core.models.operations.variant.VariantAnnotationDeleteParams.class - [JAR]
├─ org.opencb.opencga.core.models.operations.variant.VariantAnnotationIndexParams.class - [JAR]
├─ org.opencb.opencga.core.models.operations.variant.VariantAnnotationSaveParams.class - [JAR]
├─ org.opencb.opencga.core.models.operations.variant.VariantFamilyIndexParams.class - [JAR]
├─ org.opencb.opencga.core.models.operations.variant.VariantScoreDeleteParams.class - [JAR]
├─ org.opencb.opencga.core.models.operations.variant.VariantScoreIndexParams.class - [JAR]
├─ org.opencb.opencga.core.models.operations.variant.VariantSecondaryAnnotationIndexParams.class - [JAR]
├─ org.opencb.opencga.core.models.operations.variant.VariantSecondarySampleIndexParams.class - [JAR]
├─ org.opencb.opencga.core.models.operations.variant.VariantStatsDeleteParams.class - [JAR]
├─ org.opencb.opencga.core.models.operations.variant.VariantStatsExportParams.class - [JAR]
├─ org.opencb.opencga.core.models.operations.variant.VariantStatsIndexParams.class - [JAR]
├─ org.opencb.opencga.core.models.operations.variant.VariantStorageMetadataRepairToolParams.class - [JAR]
org.opencb.opencga.core.models.job
├─ org.opencb.opencga.core.models.job.Job.class - [JAR]
├─ org.opencb.opencga.core.models.job.JobAclEntryList.class - [JAR]
├─ org.opencb.opencga.core.models.job.JobAclUpdateParams.class - [JAR]
├─ org.opencb.opencga.core.models.job.JobCreateParams.class - [JAR]
├─ org.opencb.opencga.core.models.job.JobInternal.class - [JAR]
├─ org.opencb.opencga.core.models.job.JobInternalWebhook.class - [JAR]
├─ org.opencb.opencga.core.models.job.JobPermissions.class - [JAR]
├─ org.opencb.opencga.core.models.job.JobReferenceParam.class - [JAR]
├─ org.opencb.opencga.core.models.job.JobRetryParams.class - [JAR]
├─ org.opencb.opencga.core.models.job.JobStudyParam.class - [JAR]
├─ org.opencb.opencga.core.models.job.JobTop.class - [JAR]
├─ org.opencb.opencga.core.models.job.JobTopStats.class - [JAR]
├─ org.opencb.opencga.core.models.job.JobUpdateParams.class - [JAR]
├─ org.opencb.opencga.core.models.job.ToolInfo.class - [JAR]
org.opencb.opencga.core.models.project
├─ org.opencb.opencga.core.models.project.DataStore.class - [JAR]
├─ org.opencb.opencga.core.models.project.Datastores.class - [JAR]
├─ org.opencb.opencga.core.models.project.Project.class - [JAR]
├─ org.opencb.opencga.core.models.project.ProjectCreateParams.class - [JAR]
├─ org.opencb.opencga.core.models.project.ProjectInternal.class - [JAR]
├─ org.opencb.opencga.core.models.project.ProjectOrganism.class - [JAR]
├─ org.opencb.opencga.core.models.project.ProjectUpdateParams.class - [JAR]
org.opencb.opencga.core.config.storage
├─ org.opencb.opencga.core.config.storage.BenchmarkConfiguration.class - [JAR]
├─ org.opencb.opencga.core.config.storage.CacheConfiguration.class - [JAR]
├─ org.opencb.opencga.core.config.storage.CellBaseConfiguration.class - [JAR]
├─ org.opencb.opencga.core.config.storage.IOConfiguration.class - [JAR]
├─ org.opencb.opencga.core.config.storage.IndexFieldConfiguration.class - [JAR]
├─ org.opencb.opencga.core.config.storage.SampleIndexConfiguration.class - [JAR]
├─ org.opencb.opencga.core.config.storage.StorageConfiguration.class - [JAR]
├─ org.opencb.opencga.core.config.storage.StorageEngineConfiguration.class - [JAR]
├─ org.opencb.opencga.core.config.storage.StorageEnginesConfiguration.class - [JAR]
org.opencb.opencga.core.common
├─ org.opencb.opencga.core.common.BatchUtils.class - [JAR]
├─ org.opencb.opencga.core.common.ExceptionUtils.class - [JAR]
├─ org.opencb.opencga.core.common.GitRepositoryState.class - [JAR]
├─ org.opencb.opencga.core.common.IOUtils.class - [JAR]
├─ org.opencb.opencga.core.common.JacksonUtils.class - [JAR]
├─ org.opencb.opencga.core.common.MailUtils.class - [JAR]
├─ org.opencb.opencga.core.common.MemoryUsageMonitor.class - [JAR]
├─ org.opencb.opencga.core.common.PasswordUtils.class - [JAR]
├─ org.opencb.opencga.core.common.TimeUtils.class - [JAR]
├─ org.opencb.opencga.core.common.UriUtils.class - [JAR]
├─ org.opencb.opencga.core.common.VersionUtils.class - [JAR]
├─ org.opencb.opencga.core.common.YesNoAuto.class - [JAR]
org.opencb.opencga.core.tools.annotations
├─ org.opencb.opencga.core.tools.annotations.Api.class - [JAR]
├─ org.opencb.opencga.core.tools.annotations.ApiImplicitParam.class - [JAR]
├─ org.opencb.opencga.core.tools.annotations.ApiImplicitParams.class - [JAR]
├─ org.opencb.opencga.core.tools.annotations.ApiOperation.class - [JAR]
├─ org.opencb.opencga.core.tools.annotations.ApiParam.class - [JAR]
├─ org.opencb.opencga.core.tools.annotations.CliParam.class - [JAR]
├─ org.opencb.opencga.core.tools.annotations.CreateParam.class - [JAR]
├─ org.opencb.opencga.core.tools.annotations.FieldScope.class - [JAR]
├─ org.opencb.opencga.core.tools.annotations.RestParamType.class - [JAR]
├─ org.opencb.opencga.core.tools.annotations.SearchParam.class - [JAR]
├─ org.opencb.opencga.core.tools.annotations.Tool.class - [JAR]
├─ org.opencb.opencga.core.tools.annotations.ToolExecutor.class - [JAR]
├─ org.opencb.opencga.core.tools.annotations.ToolParams.class - [JAR]
├─ org.opencb.opencga.core.tools.annotations.UpdateParam.class - [JAR]
org.opencb.opencga.core.models.summaries
├─ org.opencb.opencga.core.models.summaries.FeatureCount.class - [JAR]
├─ org.opencb.opencga.core.models.summaries.StudySummary.class - [JAR]
├─ org.opencb.opencga.core.models.summaries.VariableSetSummary.class - [JAR]
├─ org.opencb.opencga.core.models.summaries.VariableSummary.class - [JAR]
org.opencb.opencga.core.models.audit
├─ org.opencb.opencga.core.models.audit.AuditRecord.class - [JAR]
org.opencb.opencga.core.tools.migration.v2_0_0
├─ org.opencb.opencga.core.tools.migration.v2_0_0.NoOpVariantStorage200MigrationToolExecutor.class - [JAR]
├─ org.opencb.opencga.core.tools.migration.v2_0_0.VariantStorage200MigrationToolExecutor.class - [JAR]
├─ org.opencb.opencga.core.tools.migration.v2_0_0.VariantStorage200MigrationToolParams.class - [JAR]
org.opencb.opencga.core.models.common
├─ org.opencb.opencga.core.models.common.AdditionalInfo.class - [JAR]
├─ org.opencb.opencga.core.models.common.Annotable.class - [JAR]
├─ org.opencb.opencga.core.models.common.AnnotationSet.class - [JAR]
├─ org.opencb.opencga.core.models.common.EntryParam.class - [JAR]
├─ org.opencb.opencga.core.models.common.Enums.class - [JAR]
├─ org.opencb.opencga.core.models.common.ExternalSource.class - [JAR]
├─ org.opencb.opencga.core.models.common.FlagAnnotation.class - [JAR]
├─ org.opencb.opencga.core.models.common.FlagValue.class - [JAR]
├─ org.opencb.opencga.core.models.common.IndexStatus.class - [JAR]
├─ org.opencb.opencga.core.models.common.Internal.class - [JAR]
├─ org.opencb.opencga.core.models.common.InternalStatus.class - [JAR]
├─ org.opencb.opencga.core.models.common.RgaIndex.class - [JAR]
├─ org.opencb.opencga.core.models.common.StatusParam.class - [JAR]
├─ org.opencb.opencga.core.models.common.StatusParams.class - [JAR]
├─ org.opencb.opencga.core.models.common.TsvAnnotationParams.class - [JAR]
org.opencb.opencga.core.models.individual
├─ org.opencb.opencga.core.models.individual.Individual.class - [JAR]
├─ org.opencb.opencga.core.models.individual.IndividualAclEntryList.class - [JAR]
├─ org.opencb.opencga.core.models.individual.IndividualAclParams.class - [JAR]
├─ org.opencb.opencga.core.models.individual.IndividualAclUpdateParams.class - [JAR]
├─ org.opencb.opencga.core.models.individual.IndividualCreateParams.class - [JAR]
├─ org.opencb.opencga.core.models.individual.IndividualInternal.class - [JAR]
├─ org.opencb.opencga.core.models.individual.IndividualMixin.class - [JAR]
├─ org.opencb.opencga.core.models.individual.IndividualPermissions.class - [JAR]
├─ org.opencb.opencga.core.models.individual.IndividualPopulation.class - [JAR]
├─ org.opencb.opencga.core.models.individual.IndividualQualityControl.class - [JAR]
├─ org.opencb.opencga.core.models.individual.IndividualReferenceParam.class - [JAR]
├─ org.opencb.opencga.core.models.individual.IndividualUpdateParams.class - [JAR]
├─ org.opencb.opencga.core.models.individual.Location.class - [JAR]
org.opencb.opencga.core.models.admin
├─ org.opencb.opencga.core.models.admin.GroupSyncParams.class - [JAR]
├─ org.opencb.opencga.core.models.admin.InstallationParams.class - [JAR]
├─ org.opencb.opencga.core.models.admin.JWTParams.class - [JAR]
├─ org.opencb.opencga.core.models.admin.TokenParams.class - [JAR]
├─ org.opencb.opencga.core.models.admin.UserCreateParams.class - [JAR]
├─ org.opencb.opencga.core.models.admin.UserImportParams.class - [JAR]
org.opencb.opencga.core.models.sample
├─ org.opencb.opencga.core.models.sample.Sample.class - [JAR]
├─ org.opencb.opencga.core.models.sample.SampleAclEntryList.class - [JAR]
├─ org.opencb.opencga.core.models.sample.SampleAclParams.class - [JAR]
├─ org.opencb.opencga.core.models.sample.SampleAclUpdateParams.class - [JAR]
├─ org.opencb.opencga.core.models.sample.SampleAlignmentQualityControlMetrics.class - [JAR]
├─ org.opencb.opencga.core.models.sample.SampleCollection.class - [JAR]
├─ org.opencb.opencga.core.models.sample.SampleCreateParams.class - [JAR]
├─ org.opencb.opencga.core.models.sample.SampleInternal.class - [JAR]
├─ org.opencb.opencga.core.models.sample.SampleInternalVariant.class - [JAR]
├─ org.opencb.opencga.core.models.sample.SampleInternalVariantAnnotationIndex.class - [JAR]
├─ org.opencb.opencga.core.models.sample.SampleInternalVariantIndex.class - [JAR]
├─ org.opencb.opencga.core.models.sample.SampleInternalVariantSecondaryAnnotationIndex.class - [JAR]
├─ org.opencb.opencga.core.models.sample.SampleInternalVariantSecondarySampleIndex.class - [JAR]
├─ org.opencb.opencga.core.models.sample.SamplePermissions.class - [JAR]
├─ org.opencb.opencga.core.models.sample.SampleProcessing.class - [JAR]
├─ org.opencb.opencga.core.models.sample.SampleQualityControl.class - [JAR]
├─ org.opencb.opencga.core.models.sample.SampleReferenceParam.class - [JAR]
├─ org.opencb.opencga.core.models.sample.SampleUpdateParams.class - [JAR]
├─ org.opencb.opencga.core.models.sample.SampleVariantQualityControlMetrics.class - [JAR]
org.opencb.opencga.core.tools.family
├─ org.opencb.opencga.core.tools.family.PedigreeGraphAnalysisExecutor.class - [JAR]
org.opencb.opencga.core.models
├─ org.opencb.opencga.core.models.AclEntry.class - [JAR]
├─ org.opencb.opencga.core.models.AclEntryList.class - [JAR]
├─ org.opencb.opencga.core.models.AclParams.class - [JAR]
├─ org.opencb.opencga.core.models.Annotation.class - [JAR]
├─ org.opencb.opencga.core.models.Dataset.class - [JAR]
├─ org.opencb.opencga.core.models.IPrivateFields.class - [JAR]
├─ org.opencb.opencga.core.models.IPrivateStudyUid.class - [JAR]
├─ org.opencb.opencga.core.models.Metadata.class - [JAR]
├─ org.opencb.opencga.core.models.PrivateFields.class - [JAR]
├─ org.opencb.opencga.core.models.PrivateStudyUid.class - [JAR]
├─ org.opencb.opencga.core.models.PrivateUidMixin.class - [JAR]
├─ org.opencb.opencga.core.models.Tool.class - [JAR]
├─ org.opencb.opencga.core.models.ToolAclEntry.class - [JAR]
org.opencb.opencga.core.models.user
├─ org.opencb.opencga.core.models.user.Account.class - [JAR]
├─ org.opencb.opencga.core.models.user.AuthenticationResponse.class - [JAR]
├─ org.opencb.opencga.core.models.user.ConfigUpdateParams.class - [JAR]
├─ org.opencb.opencga.core.models.user.FilterUpdateParams.class - [JAR]
├─ org.opencb.opencga.core.models.user.LoginParams.class - [JAR]
├─ org.opencb.opencga.core.models.user.PasswordChangeParams.class - [JAR]
├─ org.opencb.opencga.core.models.user.User.class - [JAR]
├─ org.opencb.opencga.core.models.user.UserConfiguration.class - [JAR]
├─ org.opencb.opencga.core.models.user.UserCreateParams.class - [JAR]
├─ org.opencb.opencga.core.models.user.UserFilter.class - [JAR]
├─ org.opencb.opencga.core.models.user.UserInternal.class - [JAR]
├─ org.opencb.opencga.core.models.user.UserQuota.class - [JAR]
├─ org.opencb.opencga.core.models.user.UserStatus.class - [JAR]
├─ org.opencb.opencga.core.models.user.UserUpdateParams.class - [JAR]
org.opencb.opencga.core.docs
├─ org.opencb.opencga.core.docs.DocBuilder.class - [JAR]
org.opencb.opencga.core.response
├─ org.opencb.opencga.core.response.FederationNode.class - [JAR]
├─ org.opencb.opencga.core.response.OpenCGAResult.class - [JAR]
├─ org.opencb.opencga.core.response.QueryType.class - [JAR]
├─ org.opencb.opencga.core.response.RestResponse.class - [JAR]
├─ org.opencb.opencga.core.response.VariantQueryResult.class - [JAR]
org.opencb.opencga.core.exceptions
├─ org.opencb.opencga.core.exceptions.AnalysisExecutionException.class - [JAR]
├─ org.opencb.opencga.core.exceptions.ToolException.class - [JAR]
├─ org.opencb.opencga.core.exceptions.ToolExecutorException.class - [JAR]
├─ org.opencb.opencga.core.exceptions.VersionException.class - [JAR]
org.opencb.opencga.core.testclassification.duration
├─ org.opencb.opencga.core.testclassification.duration.LongTests.class - [JAR]
├─ org.opencb.opencga.core.testclassification.duration.MediumTests.class - [JAR]
├─ org.opencb.opencga.core.testclassification.duration.ShortTests.class - [JAR]
org.opencb.opencga.core.tools.result
├─ org.opencb.opencga.core.tools.result.ExecutionResult.class - [JAR]
├─ org.opencb.opencga.core.tools.result.ExecutionResultManager.class - [JAR]
├─ org.opencb.opencga.core.tools.result.ExecutorInfo.class - [JAR]
├─ org.opencb.opencga.core.tools.result.Status.class - [JAR]
├─ org.opencb.opencga.core.tools.result.ToolStep.class - [JAR]
org.opencb.opencga.core.models.clinical
├─ org.opencb.opencga.core.models.clinical.Alert.class - [JAR]
├─ org.opencb.opencga.core.models.clinical.CancerTieringInterpretationAnalysisParams.class - [JAR]
├─ org.opencb.opencga.core.models.clinical.ClinicalAnalysis.class - [JAR]
├─ org.opencb.opencga.core.models.clinical.ClinicalAnalysisAclEntryList.class - [JAR]
├─ org.opencb.opencga.core.models.clinical.ClinicalAnalysisAclUpdateParams.class - [JAR]
├─ org.opencb.opencga.core.models.clinical.ClinicalAnalysisAlignmentQc.class - [JAR]
├─ org.opencb.opencga.core.models.clinical.ClinicalAnalysisCreateParams.class - [JAR]
├─ org.opencb.opencga.core.models.clinical.ClinicalAnalysisInternal.class - [JAR]
├─ org.opencb.opencga.core.models.clinical.ClinicalAnalysisPermissions.class - [JAR]
├─ org.opencb.opencga.core.models.clinical.ClinicalAnalysisQualityControl.class - [JAR]
├─ org.opencb.opencga.core.models.clinical.ClinicalAnalysisQualityControlUpdateParam.class - [JAR]
├─ org.opencb.opencga.core.models.clinical.ClinicalAnalysisStatus.class - [JAR]
├─ org.opencb.opencga.core.models.clinical.ClinicalAnalysisUpdateParams.class - [JAR]
├─ org.opencb.opencga.core.models.clinical.ClinicalAnalysisVariantQc.class - [JAR]
├─ org.opencb.opencga.core.models.clinical.ClinicalAnalystParam.class - [JAR]
├─ org.opencb.opencga.core.models.clinical.ClinicalCommentParam.class - [JAR]
├─ org.opencb.opencga.core.models.clinical.ClinicalConsent.class - [JAR]
├─ org.opencb.opencga.core.models.clinical.ClinicalReport.class - [JAR]
├─ org.opencb.opencga.core.models.clinical.ClinicalStatusValue.class - [JAR]
├─ org.opencb.opencga.core.models.clinical.DisorderReferenceParam.class - [JAR]
├─ org.opencb.opencga.core.models.clinical.ExomiserInterpretationAnalysisParams.class - [JAR]
├─ org.opencb.opencga.core.models.clinical.ExomiserWrapperParams.class - [JAR]
├─ org.opencb.opencga.core.models.clinical.FamilyParam.class - [JAR]
├─ org.opencb.opencga.core.models.clinical.FlagValueParam.class - [JAR]
├─ org.opencb.opencga.core.models.clinical.Interpretation.class - [JAR]
├─ org.opencb.opencga.core.models.clinical.InterpretationCreateParams.class - [JAR]
├─ org.opencb.opencga.core.models.clinical.InterpretationInternal.class - [JAR]
├─ org.opencb.opencga.core.models.clinical.InterpretationMergeParams.class - [JAR]
├─ org.opencb.opencga.core.models.clinical.InterpretationStatus.class - [JAR]
├─ org.opencb.opencga.core.models.clinical.InterpretationUpdateParams.class - [JAR]
├─ org.opencb.opencga.core.models.clinical.PriorityParam.class - [JAR]
├─ org.opencb.opencga.core.models.clinical.ProbandParam.class - [JAR]
├─ org.opencb.opencga.core.models.clinical.RgaAnalysisParams.class - [JAR]
├─ org.opencb.opencga.core.models.clinical.SampleParams.class - [JAR]
├─ org.opencb.opencga.core.models.clinical.TeamInterpretationAnalysisParams.class - [JAR]
├─ org.opencb.opencga.core.models.clinical.TieringInterpretationAnalysisParams.class - [JAR]
├─ org.opencb.opencga.core.models.clinical.ZettaInterpretationAnalysisParams.class - [JAR]
org.opencb.opencga.core.config
├─ org.opencb.opencga.core.config.AbstractServerConfiguration.class - [JAR]
├─ org.opencb.opencga.core.config.Admin.class - [JAR]
├─ org.opencb.opencga.core.config.Analysis.class - [JAR]
├─ org.opencb.opencga.core.config.Audit.class - [JAR]
├─ org.opencb.opencga.core.config.Authentication.class - [JAR]
├─ org.opencb.opencga.core.config.AuthenticationOrigin.class - [JAR]
├─ org.opencb.opencga.core.config.Catalog.class - [JAR]
├─ org.opencb.opencga.core.config.Configuration.class - [JAR]
├─ org.opencb.opencga.core.config.ConfigurationOption.class - [JAR]
├─ org.opencb.opencga.core.config.DaemonService.class - [JAR]
├─ org.opencb.opencga.core.config.DatabaseCredentials.class - [JAR]
├─ org.opencb.opencga.core.config.Email.class - [JAR]
├─ org.opencb.opencga.core.config.Execution.class - [JAR]
├─ org.opencb.opencga.core.config.FrameworkConfiguration.class - [JAR]
├─ org.opencb.opencga.core.config.GrpcServerConfiguration.class - [JAR]
├─ org.opencb.opencga.core.config.HealthCheck.class - [JAR]
├─ org.opencb.opencga.core.config.HookConfiguration.class - [JAR]
├─ org.opencb.opencga.core.config.Monitor.class - [JAR]
├─ org.opencb.opencga.core.config.Optimizations.class - [JAR]
├─ org.opencb.opencga.core.config.Panel.class - [JAR]
├─ org.opencb.opencga.core.config.RestServerConfiguration.class - [JAR]
├─ org.opencb.opencga.core.config.RgaSearchConfiguration.class - [JAR]
├─ org.opencb.opencga.core.config.SearchConfiguration.class - [JAR]
├─ org.opencb.opencga.core.config.ServerConfiguration.class - [JAR]
