View Java Class Source Code in JAR file
- Download JD-GUI to open JAR file and explore Java source code file (.class .java)
- Click menu "File → Open File..." or just drag-and-drop the JAR file in the JD-GUI window mew-regulatory-core-1.1.0.jar file.
Once you open a JAR file, all the java classes in the JAR file will be displayed.
pt.uminho.ceb.biosystems.reg4optfluxcore.container.interfaces
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.container.interfaces.IContainerIntegratedModelBuilder.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.container.interfaces.IContainerRegulatoryBuilder.class - [JAR]
pt.uminho.ceb.biosystems.reg4optfluxcore.io.readers.regulatorynetwork.formats.columnbase
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.io.readers.regulatorynetwork.formats.columnbase.AbstractColumnBaseRegulatoryNetworkReader.class - [JAR]
pt.uminho.ceb.biosystems.reg4optfluxcore.graphs.auxiliar
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.graphs.auxiliar.AbstractSyntaxTreeNodeTools.class - [JAR]
pt.uminho.ceb.biosystems.reg4optfluxcore.container
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.container.IntegratedModelContainer.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.container.RegulatoryContainer.class - [JAR]
pt.uminho.ceb.biosystems.reg4optfluxcore.regulatoryutils.excel
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.regulatoryutils.excel.RegAuxExcelResultsWriter.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.regulatoryutils.excel.RegAuxModelReader.class - [JAR]
pt.uminho.ceb.biosystems.reg4optfluxcore.regulatoryutils.string
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.regulatoryutils.string.RegStringUtils.class - [JAR]
pt.uminho.ceb.biosystems.reg4optfluxcore.io.writers
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.io.writers.CSVRegulatoryModelExporter.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.io.writers.ExportRODDModelToSBMLqual.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.io.writers.IRegulatoryModelExporter.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.io.writers.RegulatoryModelExportFormat.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.io.writers.SBMLqualRegulatoryModelExporter.class - [JAR]
pt.uminho.ceb.biosystems.reg4optfluxcore.io.readers.regulatorynetwork.formats.sbmlqual
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.io.readers.regulatorynetwork.formats.sbmlqual.SBMLQualReader.class - [JAR]
pt.uminho.ceb.biosystems.reg4optfluxcore.regulatorynetwork.networkmodel.syntaxtreeformat.mapper
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.regulatorynetwork.networkmodel.syntaxtreeformat.mapper.IRegulatoryDecoder.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.regulatorynetwork.networkmodel.syntaxtreeformat.mapper.IRegulatoryModelMapper.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.regulatorynetwork.networkmodel.syntaxtreeformat.mapper.IRegulatoryOverrideModel.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.regulatorynetwork.networkmodel.syntaxtreeformat.mapper.OverrideRegulatoryModel.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.regulatorynetwork.networkmodel.syntaxtreeformat.mapper.RegulatoryModelMapper.class - [JAR]
pt.uminho.ceb.biosystems.reg4optfluxcore.io.readers.regulatorynetwork.formats
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.io.readers.regulatorynetwork.formats.AbstractRegulatoryNetworkReader.class - [JAR]
pt.uminho.ceb.biosystems.reg4optfluxcore.integratedmodel.components
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.integratedmodel.components.BiomassCofactorsAnalyzer.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.integratedmodel.components.GeneReactionsInteractionsContainer.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.integratedmodel.components.IntegratedNetworkInitialStateContainer.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.integratedmodel.components.LinkedGenesAnalyser.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.integratedmodel.components.MetabolicComponentInteractionsContainer.class - [JAR]
pt.uminho.ceb.biosystems.reg4optfluxcore.stoichiometricgprs.convert
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.stoichiometricgprs.convert.SteadyStateGeneModelToStoichGPRConverter.class - [JAR]
pt.uminho.ceb.biosystems.reg4optfluxcore.converters
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.converters.IntegratedModelConverter.class - [JAR]
pt.uminho.ceb.biosystems.reg4optfluxcore.io.readers.regulatorynetwork.components
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.io.readers.regulatorynetwork.components.IRegulatoryNetworkReader.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.io.readers.regulatorynetwork.components.ModDelimiters.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.io.readers.regulatorynetwork.components.RegModelAuxiliarStaticMethods.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.io.readers.regulatorynetwork.components.RegModelInfoContainer.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.io.readers.regulatorynetwork.components.RegModelPreprocessingChecker.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.io.readers.regulatorynetwork.components.RegModelTempinformationContainer.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.io.readers.regulatorynetwork.components.RegulatoryModelFileType.class - [JAR]
pt.uminho.ceb.biosystems.reg4optfluxcore.io.readers.regulatorynetwork.formats.columnbase.excel
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.io.readers.regulatorynetwork.formats.columnbase.excel.ExcelRegulatoryNetworkModelReader.class - [JAR]
pt.uminho.ceb.biosystems.reg4optfluxcore.regulatoryutils.pattern
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.regulatoryutils.pattern.RegPatternUtils.class - [JAR]
pt.uminho.ceb.biosystems.reg4optfluxcore.io.readers.regulatorynetwork.formats.columnbase.text
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.io.readers.regulatorynetwork.formats.columnbase.text.CSVRegulatoryNetworkModelReader.class - [JAR]
pt.uminho.ceb.biosystems.reg4optfluxcore.container.components
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.container.components.GeneType.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.container.components.RegulatoryGeneCI.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.container.components.RegulatoryModelComponent.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.container.components.UnsuportedVariableException.class - [JAR]
pt.uminho.ceb.biosystems.reg4optfluxcore.regulatorynetwork.networkmodel.syntaxtreeformat
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.regulatorynetwork.networkmodel.syntaxtreeformat.IOptfluxRegulatoryModel.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.regulatorynetwork.networkmodel.syntaxtreeformat.OptfluxRegulatoryModel.class - [JAR]
pt.uminho.ceb.biosystems.reg4optfluxcore.regulatorynetwork.components
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.regulatorynetwork.components.GeneExtinfo.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.regulatorynetwork.components.Regulator.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.regulatorynetwork.components.RegulatoryModelType.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.regulatorynetwork.components.RegulatoryRule.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.regulatorynetwork.components.RegulatoryVariable.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.regulatorynetwork.components.VariableSignValue.class - [JAR]
pt.uminho.ceb.biosystems.reg4optfluxcore.integratedmodel.model.dynamic
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.integratedmodel.model.dynamic.DynamicIntegratedModelOptionsContainer.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.integratedmodel.model.dynamic.DynamicIntegratedNetworkVariablesContainer.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.integratedmodel.model.dynamic.DynamicIntegratedSteadyStateModel.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.integratedmodel.model.dynamic.IDynamicIntegratedSteadyStateModel.class - [JAR]
pt.uminho.ceb.biosystems.reg4optfluxcore.regulatorynetwork.networkmodel
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.regulatorynetwork.networkmodel.IRegulatoryNetwork.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.regulatorynetwork.networkmodel.InitialRegulatoryState.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.regulatorynetwork.networkmodel.RegulatoryNetworkFormat.class - [JAR]
pt.uminho.ceb.biosystems.reg4optfluxcore.io.readers.metabolicandregulatorynetworks
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.io.readers.metabolicandregulatorynetworks.FlatFileIntegratedModelReader.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.io.readers.metabolicandregulatorynetworks.SBMLIntegratedModelReader.class - [JAR]
pt.uminho.ceb.biosystems.reg4optfluxcore.integratedmodel.model
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.integratedmodel.model.IIntegratedStedystateModel.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.integratedmodel.model.IntegratedSteadyStateModel.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.integratedmodel.model.InvalidIntegratedModelException.class - [JAR]
pt.uminho.ceb.biosystems.reg4optfluxcore.stoichiometricgprs
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.stoichiometricgprs.ContainerStoichiometricGPRmodel.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.stoichiometricgprs.StoichiometricGPRSteadyStateModel.class - [JAR]
pt.uminho.ceb.biosystems.reg4optfluxcore.regulatoryutils.json
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.regulatoryutils.json.RegFieldsJson.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.regulatoryutils.json.RegGeneInfoJSONReader.class - [JAR]
pt.uminho.ceb.biosystems.reg4optfluxcore.regulatoryutils.file
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.regulatoryutils.file.RegDirAndFileUtils.class - [JAR]
pt.uminho.ceb.biosystems.reg4optfluxcore.logicalmodel.converters
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.logicalmodel.converters.AbstractOptfluxRegulatoryModelToLogicalModelConverter.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.logicalmodel.converters.OptfluxRegulatoryModelToBDDLogicalModelConverter.class - [JAR]
pt.uminho.ceb.biosystems.reg4optfluxcore.io.readers.regulatorynetwork.formats.sbmlqual.transitions
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.io.readers.regulatorynetwork.formats.sbmlqual.transitions.QualTransitionsReader.class - [JAR]
pt.uminho.ceb.biosystems.reg4optfluxcore.regulatorynetwork.networkmodel.syntaxtreeformat.dynamic
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.regulatorynetwork.networkmodel.syntaxtreeformat.dynamic.DynamicRegulatoryBooleanModel.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.regulatorynetwork.networkmodel.syntaxtreeformat.dynamic.DynamicRegulatoryModelSnapshotContainerMultipleInputRules.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.regulatorynetwork.networkmodel.syntaxtreeformat.dynamic.DynamicRegulatoryModelSnapshotContainerSingleInputRule.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.regulatorynetwork.networkmodel.syntaxtreeformat.dynamic.IDynamicRegulatoryModel.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.regulatorynetwork.networkmodel.syntaxtreeformat.dynamic.RuleProcessor.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.regulatorynetwork.networkmodel.syntaxtreeformat.dynamic.UnsuportedVariableMappingOperationException.class - [JAR]
pt.uminho.ceb.biosystems.reg4optfluxcore.regulatorynetwork.networkmodel.bddformat
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.regulatorynetwork.networkmodel.bddformat.BDDLogicalModel.class - [JAR]
├─ pt.uminho.ceb.biosystems.reg4optfluxcore.regulatorynetwork.networkmodel.bddformat.IRODDRegulatoryModel.class - [JAR]
