View Java Class Source Code in JAR file
- Download JD-GUI to open JAR file and explore Java source code file (.class .java)
- Click menu "File → Open File..." or just drag-and-drop the JAR file in the JD-GUI window embl-api-core-1.1.265.jar file.
Once you open a JAR file, all the java classes in the JAR file will be displayed.
uk.ac.ebi.embl.api.gff3
├─ uk.ac.ebi.embl.api.gff3.GFF3Record.class - [JAR]
├─ uk.ac.ebi.embl.api.gff3.GFF3RecordSet.class - [JAR]
uk.ac.ebi.embl.api.storage.tsv
├─ uk.ac.ebi.embl.api.storage.tsv.TSVReader.class - [JAR]
uk.ac.ebi.embl.api.entry.qualifier
├─ uk.ac.ebi.embl.api.entry.qualifier.AminoAcid.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.qualifier.AminoAcidFactory.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.qualifier.AnticodonQualifier.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.qualifier.CodonQualifier.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.qualifier.CodonStartQualifier.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.qualifier.CompoundLocationQualifier.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.qualifier.LocationQualifier.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.qualifier.OrganismQualifier.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.qualifier.ProteinIdQualifier.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.qualifier.Qualifier.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.qualifier.QualifierFactory.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.qualifier.Rpt_Unit_RangeQualifier.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.qualifier.Tag_PeptideQualifier.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.qualifier.TranslExceptQualifier.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.qualifier.TranslTableQualifier.class - [JAR]
uk.ac.ebi.embl.api.validation.check.entries
├─ uk.ac.ebi.embl.api.validation.check.entries.EntriesValidationCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entries.Entry_NameCheck.class - [JAR]
uk.ac.ebi.embl.api.validation.plan
├─ uk.ac.ebi.embl.api.validation.plan.EmblEntryValidationPlan.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.plan.EmblEntryValidationPlanProperty.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.plan.GFF3ValidationPlan.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.plan.GenomeAssemblyValidationPlan.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.plan.GenomeAssemblyValidationUnit.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.plan.ValidationPlan.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.plan.ValidationPlanFactory.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.plan.ValidationPlanProperty.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.plan.ValidationUnit.class - [JAR]
uk.ac.ebi.embl.api.contant
├─ uk.ac.ebi.embl.api.contant.Constant.class - [JAR]
uk.ac.ebi.embl.api.entry
├─ uk.ac.ebi.embl.api.entry.AgpRow.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.Assembly.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.ContigSequenceInfo.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.Entry.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.EntryFactory.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.MasterEntryInfo.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.Text.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.XRef.class - [JAR]
uk.ac.ebi.embl.api.taxonomy
├─ uk.ac.ebi.embl.api.taxonomy.HasTaxon.class - [JAR]
uk.ac.ebi.embl.api.entry.location
├─ uk.ac.ebi.embl.api.entry.location.AbstractLocation.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.location.Base.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.location.Between.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.location.CompoundLocation.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.location.Gap.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.location.Join.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.location.LocalBase.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.location.LocalBetween.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.location.LocalLocation.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.location.LocalRange.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.location.Location.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.location.LocationFactory.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.location.Order.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.location.Range.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.location.RemoteBase.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.location.RemoteBetween.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.location.RemoteLocation.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.location.RemoteRange.class - [JAR]
uk.ac.ebi.embl.api.validation.check
├─ uk.ac.ebi.embl.api.validation.check.CheckFileManager.class - [JAR]
uk.ac.ebi.embl.api.validation.fixer.sequence
├─ uk.ac.ebi.embl.api.validation.fixer.sequence.AnnotationOnlySequenceFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.sequence.ContigstosequenceFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.sequence.Mol_typeFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.sequence.SequenceBasesFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.sequence.SequenceToGapFeatureBasesFix.class - [JAR]
uk.ac.ebi.embl.api.validation.check.genomeassembly
├─ uk.ac.ebi.embl.api.validation.check.genomeassembly.AssemblyInfoAnalysisIdCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.genomeassembly.AssemblyInfoCoverageCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.genomeassembly.AssemblyInfoDuplicationCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.genomeassembly.AssemblyInfoMinGapLengthCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.genomeassembly.AssemblyInfoNameCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.genomeassembly.AssemblyInfoPlatformCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.genomeassembly.AssemblyInfoProgramCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.genomeassembly.AssemblyInfoProjectIdheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.genomeassembly.AssemblyInfoSamplewithDifferentProjectCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.genomeassembly.AssemblyInfoSubmissionIdCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.genomeassembly.AssemblyInfoTypeCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.genomeassembly.ChromosomeListAnalysisIdCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.genomeassembly.ChromosomeListChromosomeLocationCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.genomeassembly.ChromosomeListChromosomeNameCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.genomeassembly.ChromosomeListChromosomeTypeCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.genomeassembly.ChromosomeListObjectNameCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.genomeassembly.GenomeAssemblyValidationCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.genomeassembly.UnlocalisedListChromosomeValidationCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.genomeassembly.UnlocalisedListObjectNameValidationCheck.class - [JAR]
uk.ac.ebi.embl.api
├─ uk.ac.ebi.embl.api.EntityExistsException.class - [JAR]
├─ uk.ac.ebi.embl.api.EntityNotFoundException.class - [JAR]
├─ uk.ac.ebi.embl.api.RepositoryException.class - [JAR]
uk.ac.ebi.embl.api.validation.fixer.sourcefeature
├─ uk.ac.ebi.embl.api.validation.fixer.sourcefeature.AssemblySourceQualiferFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.sourcefeature.CountryQualifierFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.sourcefeature.HostQualifierFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.sourcefeature.SourceQualifierMissingFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.sourcefeature.StrainQualifierValueFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.sourcefeature.TaxonomicDivisionNotQualifierFix.class - [JAR]
uk.ac.ebi.embl.api.project
├─ uk.ac.ebi.embl.api.project.Center.class - [JAR]
├─ uk.ac.ebi.embl.api.project.Project.class - [JAR]
uk.ac.ebi.embl.api.validation.check.gff3
├─ uk.ac.ebi.embl.api.validation.check.gff3.AttributeCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.gff3.GFF3ValidationCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.gff3.StartEndCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.gff3.TypeCheck.class - [JAR]
uk.ac.ebi.embl.api.validation.check.entry
├─ uk.ac.ebi.embl.api.validation.check.entry.AGPValidationCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.AntiCodonTranslationCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.AsciiCharacterCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.AssemblyLevelDataclassCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.AssemblyLevelEntryNameCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.AssemblySecondarySpanCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.AssemblyTopologyCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.Assembly_gapFeatureCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.CitationQualifierCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.DataclassCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.DuplicateFeatureCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.EntryContigsCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.EntryFeatureLocationCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.EntryMolTypeCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.EntryNameExistsCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.EntryProjectIdCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.EntryValidationCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.ExonFeaturesIntervalCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.FeatureAndSourceQualifierCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.FeaturewithRemoteLocationCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.GapFeatureBasesCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.GapFeatureLocationsCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.GeneAssociationCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.GeneFeatureLocusTagCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.HoldDateCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.KWCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.LocusTagAssociationCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.LocusTagPrefixCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.LocustagExistsCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.MasterEntryDescriptionCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.MasterEntryExistsCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.MasterEntrySourceCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.MoleculeTypeAndDataclassCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.MoleculeTypeAndFeatureCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.MoltypeExistsCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.OperonFeatureCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.OrganismAndPermittedQualifierCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.PeptideFeatureCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.PrimaryAccessionCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.PropeptideLocationCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.ProteinIdExistsCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.QualifierAndRequiredQualifierinEntryCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.QualifierPatternAndFeatureCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.QualifierValueNotQualifierEntryCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.QualifierValueRequiredQualifierValueEntryCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.ReferenceCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.SequenceBasesCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.entry.WGSGapCheck.class - [JAR]
uk.ac.ebi.embl.api.validation.fixer.feature
├─ uk.ac.ebi.embl.api.validation.fixer.feature.AssemblyFeatureRemoteLocationFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.feature.CollectionDateQualifierFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.feature.EC_numberValueFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.feature.EC_numberfromProductValueFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.feature.ExclusiveQualifierTransformToNoteQualifierFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.feature.ExperimentQualifierFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.feature.FeatureLocationFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.feature.FeatureQualifierDuplicateValueFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.feature.FeatureQualifierRenameFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.feature.FeatureRenameFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.feature.Isolation_sourceQualifierFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.feature.Lat_lonValueFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.feature.Linkage_evidenceFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.feature.LocusTagValueFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.feature.ObsoleteFeatureFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.feature.ObsoleteFeaturetoNewFeatureFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.feature.QualifierValueFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.feature.QualifierWithinQualifierFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.feature.Transl_exceptLocationFix.class - [JAR]
uk.ac.ebi.embl.api.validation.fixer.entry
├─ uk.ac.ebi.embl.api.validation.fixer.entry.AgpComponentAccessionFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.entry.AgptoConFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.entry.AnticodonQualifierFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.entry.AssemblyLevelDataClassFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.entry.AssemblyLevelEntryNameFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.entry.AssemblyLevelSubmitterReferenceFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.entry.AssemblyTopologyFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.entry.CDS_RNA_LocusFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.entry.ContoAGPFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.entry.DataclassFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.entry.DeleteEntryOnErrorFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.entry.GaptoAssemblyGapFeatureFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.entry.GeneAssociatedwithFeatureFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.entry.GeneAssociationFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.entry.GeneSynonymFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.entry.HoldDateFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.entry.JournalFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.entry.LocusTagAssociationFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.entry.MoleculeTypeAndQualifierFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.entry.NonContoAGPFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.entry.ProteinIdRemovalFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.entry.ReferencePositionFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.entry.SubmitterAccessionFix.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.fixer.entry.TPA_dataclass_Fix.class - [JAR]
uk.ac.ebi.embl.api.validation.cvtable
├─ uk.ac.ebi.embl.api.validation.cvtable.cv_fqual_value_fix_table.class - [JAR]
uk.ac.ebi.embl.api.entry.genomeassembly
├─ uk.ac.ebi.embl.api.entry.genomeassembly.AssemblyInfoEntry.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.genomeassembly.ChromosomeEntry.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.genomeassembly.GCSEntry.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.genomeassembly.UnlocalisedEntry.class - [JAR]
uk.ac.ebi.embl.api.storage
├─ uk.ac.ebi.embl.api.storage.CachedFileDataManager.class - [JAR]
├─ uk.ac.ebi.embl.api.storage.DataManager.class - [JAR]
├─ uk.ac.ebi.embl.api.storage.DataRow.class - [JAR]
├─ uk.ac.ebi.embl.api.storage.DataSet.class - [JAR]
uk.ac.ebi.embl.api.validation.annotation
├─ uk.ac.ebi.embl.api.validation.annotation.Description.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.annotation.ExcludeScope.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.annotation.GroupIncludeScope.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.annotation.RemoteExclude.class - [JAR]
uk.ac.ebi.embl.api.validation.check.sequence
├─ uk.ac.ebi.embl.api.validation.check.sequence.AnnotationOnlySequenceCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.sequence.SequenceBasesCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.sequence.SequenceExistsCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.sequence.SequenceLengthCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.sequence.SequenceToGapFeatureBasesCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.sequence.SequenceValidationCheck.class - [JAR]
uk.ac.ebi.embl.api.translation
├─ uk.ac.ebi.embl.api.translation.AbstractTranslator.class - [JAR]
├─ uk.ac.ebi.embl.api.translation.CdsTranslator.class - [JAR]
├─ uk.ac.ebi.embl.api.translation.Codon.class - [JAR]
├─ uk.ac.ebi.embl.api.translation.CodonTranslator.class - [JAR]
├─ uk.ac.ebi.embl.api.translation.SimpleTranslator.class - [JAR]
├─ uk.ac.ebi.embl.api.translation.TranslationResult.class - [JAR]
├─ uk.ac.ebi.embl.api.translation.TranslationResultWriter.class - [JAR]
├─ uk.ac.ebi.embl.api.translation.TranslationTable.class - [JAR]
├─ uk.ac.ebi.embl.api.translation.TranslationTableDescriptor.class - [JAR]
├─ uk.ac.ebi.embl.api.translation.TranslationTableFactory.class - [JAR]
├─ uk.ac.ebi.embl.api.translation.Translator.class - [JAR]
├─ uk.ac.ebi.embl.api.translation.UnAmbiguousCodon.class - [JAR]
uk.ac.ebi.embl.api.validation.check.sourcefeature
├─ uk.ac.ebi.embl.api.validation.check.sourcefeature.ChromosomeSourceQualifierCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.sourcefeature.HostQualifierCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.sourcefeature.MoleculeTypeAndOrganismCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.sourcefeature.MoleculeTypeAndSourceQualifierCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.sourcefeature.OrganismAndRequiredQualifierCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.sourcefeature.SequenceCoverageCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.sourcefeature.SourceFeatureOnlyCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.sourcefeature.SourceFeatureQualifierCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.sourcefeature.SourceQualifierPatternAndFeatureCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.sourcefeature.TaxonomicDivisionQualifierCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.sourcefeature.Type_materialQualifierCheck.class - [JAR]
uk.ac.ebi.embl.api.validation.helper
├─ uk.ac.ebi.embl.api.validation.helper.ByteBufferUtils.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.helper.DataclassProvider.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.helper.EntryUtils.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.helper.FileUtils.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.helper.FlatFileComparator.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.helper.FlatFileComparatorException.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.helper.FlatFileComparatorOptions.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.helper.FlattenedMessageResult.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.helper.FlattenedValidationPlanResult.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.helper.QualifierHelper.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.helper.Utils.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.helper.ValidationMessageComparator.class - [JAR]
uk.ac.ebi.embl.api.validation.helper.location
├─ uk.ac.ebi.embl.api.validation.helper.location.LocationStringParser.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.helper.location.LocationToStringCoverter.class - [JAR]
uk.ac.ebi.embl.api.validation.helper.taxon
├─ uk.ac.ebi.embl.api.validation.helper.taxon.TaxonHelper.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.helper.taxon.TaxonHelperImpl.class - [JAR]
uk.ac.ebi.embl.api.validation
├─ uk.ac.ebi.embl.api.validation.CVTable.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.DefaultOrigin.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.EmblEntryValidationCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.EntryValidations.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.ExtendedMessage.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.ExtendedResult.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.FileName.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.FileType.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.FlatFileOrigin.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.GlobalDataSets.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.HasOrigin.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.LocationComparator.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.Origin.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.SequenceEntryUtils.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.SequenceType.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.Severity.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.ValidationCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.ValidationEngineException.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.ValidationException.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.ValidationMessage.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.ValidationMessageManager.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.ValidationPlanResult.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.ValidationResult.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.ValidationScope.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.Validator.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.ValidatorImpl.class - [JAR]
uk.ac.ebi.ena.xml
├─ uk.ac.ebi.ena.xml.SimpleXmlWriter.class - [JAR]
uk.ac.ebi.embl.api.entry.sequence
├─ uk.ac.ebi.embl.api.entry.sequence.AbstractSequence.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.sequence.AccessionFormatException.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.sequence.Complementer.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.sequence.ReverseComplementer.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.sequence.Segment.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.sequence.SegmentFactory.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.sequence.Sequence.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.sequence.SequenceAccession.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.sequence.SequenceFactory.class - [JAR]
uk.ac.ebi.embl.api.entry.feature
├─ uk.ac.ebi.embl.api.entry.feature.CdsFeature.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.feature.Feature.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.feature.FeatureFactory.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.feature.PeptideFeature.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.feature.SourceFeature.class - [JAR]
uk.ac.ebi.embl.api.entry.reference
├─ uk.ac.ebi.embl.api.entry.reference.Article.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.reference.Book.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.reference.ElectronicReference.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.reference.Patent.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.reference.Person.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.reference.Publication.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.reference.Reference.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.reference.ReferenceFactory.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.reference.Submission.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.reference.Thesis.class - [JAR]
├─ uk.ac.ebi.embl.api.entry.reference.Unpublished.class - [JAR]
uk.ac.ebi.embl.api.validation.dao
├─ uk.ac.ebi.embl.api.validation.dao.EntryDAOUtils.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.dao.EntryDAOUtilsImpl.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.dao.EraproDAOUtils.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.dao.EraproDAOUtilsImpl.class - [JAR]
uk.ac.ebi.embl.api.checksum
├─ uk.ac.ebi.embl.api.checksum.CRC32.class - [JAR]
├─ uk.ac.ebi.embl.api.checksum.MD5Checksum.class - [JAR]
uk.ac.ebi.embl.api.validation.check.feature
├─ uk.ac.ebi.embl.api.validation.check.feature.AntiCodonQualifierCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.feature.CdsFeatureAminoAcidCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.feature.CdsFeatureTranslationCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.feature.CollectionDateQualifierCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.feature.DeprecatedQualifiersCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.feature.EC_numberCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.feature.EC_numberFormatCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.feature.ExclusiveQualifiersCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.feature.ExclusiveQualifiersWithSameValueCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.feature.FeatureKeyCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.feature.FeatureLengthCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.feature.FeatureLocationCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.feature.FeatureLocationTypeCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.feature.FeatureQualifiersRequiredCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.feature.FeatureValidationCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.feature.IntronLengthWithinCDSCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.feature.NCBIQualifierCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.feature.NcRNAQualifierValueAndQualifierPatternCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.feature.PCRPrimersQualifierCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.feature.QualifierAndRequiredQualifierinFeatureCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.feature.QualifierCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.feature.QualifierPatternAndQualifierCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.feature.QualifierValueNotQualifierCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.feature.QualifierValueNotQualifierPatternCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.feature.QualifierValueRequiredQualifierStartsWithValueCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.feature.TranslExceptQualifierCheck.class - [JAR]
├─ uk.ac.ebi.embl.api.validation.check.feature.UnbalancedParenthesesCheck.class - [JAR]
