View Java Class Source Code in JAR file
- Download JD-GUI to open JAR file and explore Java source code file (.class .java)
- Click menu "File → Open File..." or just drag-and-drop the JAR file in the JD-GUI window interproscan-io-5.36-75.0.jar file.
Once you open a JAR file, all the java classes in the JAR file will be displayed.
uk.ac.ebi.interpro.scan.io.pirsf.hmmer3
├─ uk.ac.ebi.interpro.scan.io.pirsf.hmmer3.PirsfHmmer3RawMatchParser.class - [JAR]
uk.ac.ebi.interpro.scan.io.pirsf.hmmer2
├─ uk.ac.ebi.interpro.scan.io.pirsf.hmmer2.PirsfBlastResultParser.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.pirsf.hmmer2.PirsfDatFileInfoHolder.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.pirsf.hmmer2.PirsfDatFileParser.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.pirsf.hmmer2.PirsfDatRecord.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.pirsf.hmmer2.PirsfFileUtil.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.pirsf.hmmer2.PirsfMatchTempParser.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.pirsf.hmmer2.PirsfSubfamilyFileParser.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.pirsf.hmmer2.SfTbFileParser.class - [JAR]
uk.ac.ebi.interpro.scan.io.prosite
├─ uk.ac.ebi.interpro.scan.io.prosite.PrositeDatFileParser.class - [JAR]
uk.ac.ebi.interpro.scan.io.phobius
├─ uk.ac.ebi.interpro.scan.io.phobius.PhobiusDummyParser.class - [JAR]
uk.ac.ebi.interpro.scan.io.prodom.model
├─ uk.ac.ebi.interpro.scan.io.prodom.model.ProDomModelParser.class - [JAR]
uk.ac.ebi.interpro.scan.io.getorf
├─ uk.ac.ebi.interpro.scan.io.getorf.GetOrfDescriptionLineParser.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.getorf.MatchSiteData.class - [JAR]
uk.ac.ebi.interpro.scan.io.sequence
├─ uk.ac.ebi.interpro.scan.io.sequence.FastaEntryWriter.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.sequence.FastaSequenceReader.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.sequence.SequenceReader.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.sequence.SequenceRecord.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.sequence.SequenceWriter.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.sequence.XrefParser.class - [JAR]
uk.ac.ebi.interpro.scan.io.signalp.model
├─ uk.ac.ebi.interpro.scan.io.signalp.model.SignalPDummyParser.class - [JAR]
uk.ac.ebi.interpro.scan.io.match.prints.parsemodel
├─ uk.ac.ebi.interpro.scan.io.match.prints.parsemodel.PrintsMotif.class - [JAR]
uk.ac.ebi.interpro.scan.io.signalp
├─ uk.ac.ebi.interpro.scan.io.signalp.SignalPTempOptionParser.class - [JAR]
uk.ac.ebi.interpro.scan.io.match.prosite
├─ uk.ac.ebi.interpro.scan.io.match.prosite.HamapMatchParser.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.prosite.HamapPfsearchMatchParser.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.prosite.PrositeMatchParser.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.prosite.PrositePatternMatchParser.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.prosite.PrositePfsearchMatchParser.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.prosite.PrositeProfileMatchParser.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.prosite.PrositeSequenceMatch.class - [JAR]
uk.ac.ebi.interpro.scan.io.match.tmhmm
├─ uk.ac.ebi.interpro.scan.io.match.tmhmm.TMHMMMatchParser.class - [JAR]
uk.ac.ebi.interpro.scan.io.serialization
├─ uk.ac.ebi.interpro.scan.io.serialization.ObjectSerializerDeserializer.class - [JAR]
uk.ac.ebi.interpro.scan.io.tmhmm
├─ uk.ac.ebi.interpro.scan.io.tmhmm.PredictionMaxScoreWrapper.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.tmhmm.TMHMMPredictionLineParser.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.tmhmm.TMHMMPredictionTableParser.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.tmhmm.TMHMMProtein.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.tmhmm.TMHMMRawResultParser.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.tmhmm.TMHMMSignatureBuilder.class - [JAR]
uk.ac.ebi.interpro.scan.io.superfamily.model
├─ uk.ac.ebi.interpro.scan.io.superfamily.model.SuperFamilyModelParser.class - [JAR]
uk.ac.ebi.interpro.scan.io.match.panther
├─ uk.ac.ebi.interpro.scan.io.match.panther.PantherMatchParser.class - [JAR]
uk.ac.ebi.interpro.scan.io.match.phobius.parsemodel
├─ uk.ac.ebi.interpro.scan.io.match.phobius.parsemodel.PhobiusFeature.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.phobius.parsemodel.PhobiusProtein.class - [JAR]
uk.ac.ebi.interpro.scan.io.smart
├─ uk.ac.ebi.interpro.scan.io.smart.SmartOverlappingFileParser.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.smart.SmartOverlaps.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.smart.SmartThresholdFileParser.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.smart.SmartThresholds.class - [JAR]
uk.ac.ebi.interpro.scan.io.gene3d
├─ uk.ac.ebi.interpro.scan.io.gene3d.CathDomainListRecord.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.gene3d.CathDomainListResourceReader.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.gene3d.CathResolveHitsOutputParser.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.gene3d.CathResolverRecord.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.gene3d.DomainFinderRecord.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.gene3d.DomainFinderResourceReader.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.gene3d.DomainFinderResourceWriter.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.gene3d.Model2SfReader.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.gene3d.SsfFileWriter.class - [JAR]
uk.ac.ebi.interpro.scan.io.match.hmmer.hmmer2.parsemodel
├─ uk.ac.ebi.interpro.scan.io.match.hmmer.hmmer2.parsemodel.Hmmer2HmmPfamDomainMatch.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.hmmer.hmmer2.parsemodel.Hmmer2HmmPfamSearchRecord.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.hmmer.hmmer2.parsemodel.Hmmer2HmmPfamSequenceMatch.class - [JAR]
uk.ac.ebi.interpro.scan.io.signalp.match
├─ uk.ac.ebi.interpro.scan.io.signalp.match.SignalPMatchParser.class - [JAR]
uk.ac.ebi.interpro.scan.io.panther
├─ uk.ac.ebi.interpro.scan.io.panther.PantherModelDirectoryParser.class - [JAR]
uk.ac.ebi.interpro.scan.io.model
├─ uk.ac.ebi.interpro.scan.io.model.GaValuesRetriever.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.model.HmmerModelParser.class - [JAR]
uk.ac.ebi.interpro.scan.io.prodom.match
├─ uk.ac.ebi.interpro.scan.io.prodom.match.BlastProDomMatchParser.class - [JAR]
uk.ac.ebi.interpro.scan.io.match.writer
├─ uk.ac.ebi.interpro.scan.io.match.writer.GFF3Feature.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.writer.GFFResultWriterForNucSeqs.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.writer.GFFResultWriterForProtSeqs.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.writer.GoXrefComparator.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.writer.PathwayXrefComparator.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.writer.ProteinMatchesGFFResultWriter.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.writer.ProteinMatchesJSONResultWriter.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.writer.ProteinMatchesRAWResultWriter.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.writer.ProteinMatchesResultWriter.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.writer.ProteinMatchesTSVProResultWriter.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.writer.ProteinMatchesTSVResultWriter.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.writer.ProteinMatchesWriter.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.writer.ProteinSiteMatchesTSVResultWriter.class - [JAR]
uk.ac.ebi.interpro.scan.io.mobidb
├─ uk.ac.ebi.interpro.scan.io.mobidb.MobiDBDummyModelParser.class - [JAR]
uk.ac.ebi.interpro.scan.io.match.hmmer.hmmer2
├─ uk.ac.ebi.interpro.scan.io.match.hmmer.hmmer2.HmmPfamParser.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.hmmer.hmmer2.Hmmer2ParserSupport.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.hmmer.hmmer2.PirsfHmmer2ParserSupport.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.hmmer.hmmer2.SmartHmmer2ParserSupport.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.hmmer.hmmer2.TigrfamHmmer2ParserSupport.class - [JAR]
uk.ac.ebi.interpro.scan.io.match.hmmer.hmmer3
├─ uk.ac.ebi.interpro.scan.io.match.hmmer.hmmer3.AbstractHmmer3ParserSupport.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.hmmer.hmmer3.Gene3DHmmer3ParserSupport.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.hmmer.hmmer3.Hmmer3DomTblParser.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.hmmer.hmmer3.Hmmer3MatchParser.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.hmmer.hmmer3.Hmmer3ParserSupport.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.hmmer.hmmer3.Hmmer3ScanMatchParser.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.hmmer.hmmer3.Hmmer3SearchMatchParser.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.hmmer.hmmer3.Pfam_A_Hmmer3Hmmer3ParserSupport.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.hmmer.hmmer3.SFLDHmmer3MatchParser.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.hmmer.hmmer3.SFLDHmmer3ParserSupport.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.hmmer.hmmer3.TigrFamHmmer3ParserSupport.class - [JAR]
uk.ac.ebi.interpro.scan.io.match.coils
├─ uk.ac.ebi.interpro.scan.io.match.coils.CoilsMatchParser.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.coils.ParseCoilsMatch.class - [JAR]
uk.ac.ebi.interpro.scan.io.match.hmmer.hmmer3.parsemodel
├─ uk.ac.ebi.interpro.scan.io.match.hmmer.hmmer3.parsemodel.DomTblDomainMatch.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.hmmer.hmmer3.parsemodel.DomainMatch.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.hmmer.hmmer3.parsemodel.HmmScanSearchRecord.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.hmmer.hmmer3.parsemodel.HmmSearchRecord.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.hmmer.hmmer3.parsemodel.ModelMatchTMP.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.hmmer.hmmer3.parsemodel.SequenceDomainMatch.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.hmmer.hmmer3.parsemodel.SequenceMatch.class - [JAR]
uk.ac.ebi.interpro.scan.io.match.cdd
├─ uk.ac.ebi.interpro.scan.io.match.cdd.CDDMatchParser.class - [JAR]
uk.ac.ebi.interpro.scan.io.prints
├─ uk.ac.ebi.interpro.scan.io.prints.FingerPRINTSHierarchyDBParser.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.prints.KdatParser.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.prints.PvalParser.class - [JAR]
uk.ac.ebi.interpro.scan.io.cdd
├─ uk.ac.ebi.interpro.scan.io.cdd.CDDModelParser.class - [JAR]
uk.ac.ebi.interpro.scan.io.match.prints
├─ uk.ac.ebi.interpro.scan.io.match.prints.PrintsMatchParser.class - [JAR]
uk.ac.ebi.interpro.scan.io.match.phobius
├─ uk.ac.ebi.interpro.scan.io.match.phobius.PhobiusMatchParser.class - [JAR]
uk.ac.ebi.interpro.scan.io.coils
├─ uk.ac.ebi.interpro.scan.io.coils.CoilsDummyParser.class - [JAR]
uk.ac.ebi.interpro.scan.io.cli
├─ uk.ac.ebi.interpro.scan.io.cli.CommandLineConversation.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.cli.CommandLineConversationImpl.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.cli.CommandLineConversationMonitor.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.cli.FileIsNotADirectoryException.class - [JAR]
uk.ac.ebi.interpro.scan.io
├─ uk.ac.ebi.interpro.scan.io.AbstractModelFileParser.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.AbstractResourceReader.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.AbstractResourceWriter.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.ExternallySetLocationTemporaryDirectoryManager.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.FileOutputFormat.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.GFFWriter.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.InstallerTemporaryDirectoryManagerImpl.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.ModelFileParser.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.NoopTemporaryDirectoryManagerImpl.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.OsUtils.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.ParseException.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.ResourceReader.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.ResourceWriter.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.TSVWriter.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.TemporaryDirectoryManager.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.TemporaryDirectoryManagerImpl.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.XmlWriter.class - [JAR]
uk.ac.ebi.interpro.scan.io.match
├─ uk.ac.ebi.interpro.scan.io.match.AbstractLineMatchParser.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.MatchAndSiteParser.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.match.MatchParser.class - [JAR]
uk.ac.ebi.interpro.scan.io.superfamily.match
├─ uk.ac.ebi.interpro.scan.io.superfamily.match.SuperFamilyHmmer3MatchParser.class - [JAR]
uk.ac.ebi.interpro.scan.io.match.mobidb
├─ uk.ac.ebi.interpro.scan.io.match.mobidb.MobiDBMatchParser.class - [JAR]
uk.ac.ebi.interpro.scan.io.unmarshal.xml.interpro
├─ uk.ac.ebi.interpro.scan.io.unmarshal.xml.interpro.BuildNewInterProGOMappingsMain.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.unmarshal.xml.interpro.GoTerm.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.unmarshal.xml.interpro.InterProEntry.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.unmarshal.xml.interpro.InterProXMLUnmarshaller.class - [JAR]
├─ uk.ac.ebi.interpro.scan.io.unmarshal.xml.interpro.SignatureLibraryIntegratedMethods.class - [JAR]