jar

uk.ac.ebi.interpro.scan : interproscan-management

Maven & Gradle

Jul 15, 2019
1 usages
182 stars

InterProScan Management Module · InterProScan Management Module

Table Of Contents

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Download uk.ac.ebi.interpro.scan : interproscan-management JAR file - Latest Versions:

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Download uk.ac.ebi.interpro.scan : interproscan-management JAR file - All Versions:

Version Vulnerabilities Size Updated
5.36
5.35
5.34
5.33
5.32
5.31
5.30
5.29
5.28
5.27
5.26
5.25
5.24
5.23
5.22
5.21
5.19

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uk.ac.ebi.interpro.scan.management.model.implementations.stepInstanceCreation.nucleotide

├─ uk.ac.ebi.interpro.scan.management.model.implementations.stepInstanceCreation.nucleotide.RunGetOrfParserStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.stepInstanceCreation.nucleotide.RunGetOrfStep.class - [JAR]

uk.ac.ebi.interpro.scan.management.model.implementations.stepInstanceCreation.proteinLoad

├─ uk.ac.ebi.interpro.scan.management.model.implementations.stepInstanceCreation.proteinLoad.FastaFileLoadStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.stepInstanceCreation.proteinLoad.StepCreationSequenceLoadListener.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.stepInstanceCreation.proteinLoad.UniparcProteinLoadStep.class - [JAR]

uk.ac.ebi.interpro.scan.management.model.implementations.prints

├─ uk.ac.ebi.interpro.scan.management.model.implementations.prints.ParsePrintsOutputStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.prints.PrintsPostProcessingStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.prints.RunFingerPrintScanStep.class - [JAR]

uk.ac.ebi.interpro.scan.management.model.implementations.coils

├─ uk.ac.ebi.interpro.scan.management.model.implementations.coils.ParseCoilsOutputStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.coils.RunCoilsBinaryStep.class - [JAR]

uk.ac.ebi.interpro.scan.management.model.implementations.mobidb

├─ uk.ac.ebi.interpro.scan.management.model.implementations.mobidb.ParseMobiDBOutputStepV2.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.mobidb.RunMobiDBBinaryStep.class - [JAR]

uk.ac.ebi.interpro.scan.management.model.implementations.hamap

├─ uk.ac.ebi.interpro.scan.management.model.implementations.hamap.HamapCreateMiniDatabaseStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.hamap.HamapHmmPostProcessingStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.hamap.HamapPostProcessingStep.class - [JAR]

uk.ac.ebi.interpro.scan.management.model

├─ uk.ac.ebi.interpro.scan.management.model.Job.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.JobStatusChecker.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.JobStatusWrapper.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.Jobs.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.SerialGroup.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.Step.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.StepExecution.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.StepExecutionState.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.StepInstance.class - [JAR]

uk.ac.ebi.interpro.scan.management.model.implementations.phobius

├─ uk.ac.ebi.interpro.scan.management.model.implementations.phobius.ParsePhobiusOutputStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.phobius.RunPhobiusBinaryStep.class - [JAR]

uk.ac.ebi.interpro.scan.management.model.implementations.pirsf.hmmer2

├─ uk.ac.ebi.interpro.scan.management.model.implementations.pirsf.hmmer2.BlastPostProcessingStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.pirsf.hmmer2.OverlapPostProcessingStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.pirsf.hmmer2.ParsePIRSFHmmpfamOutputStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.pirsf.hmmer2.PirsfBlastStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.pirsf.hmmer2.PirsfPersistStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.pirsf.hmmer2.PirsfRunHmmerBinaryStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.pirsf.hmmer2.PirsfSubfamPersistStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.pirsf.hmmer2.SubfamilyPostProcessingStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.pirsf.hmmer2.WriteFastaFileForBlastStep.class - [JAR]

uk.ac.ebi.interpro.scan.management.model.implementations.pirsf.hmmer3

├─ uk.ac.ebi.interpro.scan.management.model.implementations.pirsf.hmmer3.ParsePirsfOutputStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.pirsf.hmmer3.PirsfBinaryStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.pirsf.hmmer3.PirsfPostProcessAndPersistStep.class - [JAR]

uk.ac.ebi.interpro.scan.management.model.implementations.gene3d

├─ uk.ac.ebi.interpro.scan.management.model.implementations.gene3d.Gene3DParseAndPersistOutputStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.gene3d.Gene3DPostProcessingStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.gene3d.RunAssignCathFamilyBinaryStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.gene3d.RunCathResolveHitsBinaryStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.gene3d.RunDomainFinder3BinaryStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.gene3d.WriteGene3dSsfFileStep.class - [JAR]

uk.ac.ebi.interpro.scan.management.model.implementations.sfld

├─ uk.ac.ebi.interpro.scan.management.model.implementations.sfld.RunSFLDBinaryStep.class - [JAR]

uk.ac.ebi.interpro.scan.management.model.implementations.hmmer3

├─ uk.ac.ebi.interpro.scan.management.model.implementations.hmmer3.Gene3dHmmer3FilterStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.hmmer3.Gene3dHmmer3ParseStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.hmmer3.ParseTigrFamHMMER3OutputStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.hmmer3.SFLDHmmer3FilterStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.hmmer3.SFLDHmmer3ParseStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.hmmer3.SFLDHmmer3ScanParseStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.hmmer3.TigrFamHmmer3FilterStep.class - [JAR]

uk.ac.ebi.interpro.scan.management.model.implementations.hmmer

├─ uk.ac.ebi.interpro.scan.management.model.implementations.hmmer.RunHmmerBinaryStep.class - [JAR]

uk.ac.ebi.interpro.scan.management.model.implementations.stepInstanceCreation

├─ uk.ac.ebi.interpro.scan.management.model.implementations.stepInstanceCreation.AbstractStepInstanceCreator.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.stepInstanceCreation.StepInstanceCreatingStep.class - [JAR]

uk.ac.ebi.interpro.scan.management.model.implementations.panther

├─ uk.ac.ebi.interpro.scan.management.model.implementations.panther.PantherBinaryStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.panther.PantherNewBinaryStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.panther.PantherParseStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.panther.PantherPostProcessingStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.panther.PantherScoreStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.panther.RunPantherScoreStep.class - [JAR]

uk.ac.ebi.interpro.scan.management.model.implementations.test

├─ uk.ac.ebi.interpro.scan.management.model.implementations.test.TestRawDataStoredStep.class - [JAR]

uk.ac.ebi.interpro.scan.management.model.implementations

├─ uk.ac.ebi.interpro.scan.management.model.implementations.AbstractParseHmmpfamOutputStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.CompositeParseStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.DeleteFileStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.FileContentChecker.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.FilterStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.MatchAndSitePostProcessingStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.MatchPostProcessingStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.ParseAndPersistStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.ParseStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.RunBinaryStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.WriteFastaFileStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.WriteOutputStep.class - [JAR]

uk.ac.ebi.interpro.scan.management.model.implementations.stepInstanceCreation.memberDatabaseLoad

├─ uk.ac.ebi.interpro.scan.management.model.implementations.stepInstanceCreation.memberDatabaseLoad.StepCreationSignatureDatabaseLoadListener.class - [JAR]

uk.ac.ebi.interpro.scan.management.model.implementations.writer

├─ uk.ac.ebi.interpro.scan.management.model.implementations.writer.CondensedViewHTMLResultWriter.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.writer.GraphicalOutputResultWriter.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.writer.MatchPopupHTMLResultWriter.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.writer.PopupHTMLResultWriter.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.writer.ProteinMatchesHTMLResultWriter.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.writer.ProteinMatchesSVGResultWriter.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.writer.ResiduePopupHTMLResultWriter.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.writer.StructMatchPopupHTMLResultWriter.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.writer.SuperMatchPopupHTMLResultWriter.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.writer.TarArchiveBuilder.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.writer.UrlFriendlyIdGenerator.class - [JAR]

uk.ac.ebi.interpro.scan.management.model.implementations.smart

├─ uk.ac.ebi.interpro.scan.management.model.implementations.smart.ParseSmartHmmpfamOutputStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.smart.RunSmartBinaryStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.smart.SmartPostProcessingStep.class - [JAR]

uk.ac.ebi.interpro.scan.management.model.implementations.cdd

├─ uk.ac.ebi.interpro.scan.management.model.implementations.cdd.CDDPostProcessingStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.cdd.ParseCDDOutputStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.cdd.RunCDDPostBlastUtilityStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.cdd.RunCDDRPSBlastStep.class - [JAR]

uk.ac.ebi.interpro.scan.management.model.implementations.hmmer3.PfamA

├─ uk.ac.ebi.interpro.scan.management.model.implementations.hmmer3.PfamA.ParsePfam_A_HMMER3OutputStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.hmmer3.PfamA.Pfam_A_PostProcessingStep.class - [JAR]

uk.ac.ebi.interpro.scan.management.dao

├─ uk.ac.ebi.interpro.scan.management.dao.StepExecutionDAO.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.dao.StepExecutionDAOImpl.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.dao.StepInstanceDAO.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.dao.StepInstanceDAOImpl.class - [JAR]

uk.ac.ebi.interpro.scan.management.model.implementations.tigrfam

├─ uk.ac.ebi.interpro.scan.management.model.implementations.tigrfam.ParseTigrFamHmmpfamOutputStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.tigrfam.TigrFamPostProcessingStep.class - [JAR]

uk.ac.ebi.interpro.scan.management.model.implementations.signalp

├─ uk.ac.ebi.interpro.scan.management.model.implementations.signalp.ParseAndPersistBinaryOutputStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.signalp.RunSignalPBinaryStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.signalp.RunSignalPTempOptionCheckStep.class - [JAR]

uk.ac.ebi.interpro.scan.management.model.implementations.tmhmm

├─ uk.ac.ebi.interpro.scan.management.model.implementations.tmhmm.TMHMMBinaryStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.tmhmm.TMHMMParseStep.class - [JAR]

uk.ac.ebi.interpro.scan.management.model.implementations.prodom

├─ uk.ac.ebi.interpro.scan.management.model.implementations.prodom.ParseAndPersistProDomOutputStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.prodom.RunProDomBlast3iStep.class - [JAR]

uk.ac.ebi.interpro.scan.management.model.implementations.superfamily

├─ uk.ac.ebi.interpro.scan.management.model.implementations.superfamily.ParseAndPersistSuperFamilyOutputStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.superfamily.RunSuperFamilyAss3Step.class - [JAR]

uk.ac.ebi.interpro.scan.management.model.implementations.prosite

├─ uk.ac.ebi.interpro.scan.management.model.implementations.prosite.ParseHamapPfsearchOutputStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.prosite.ParsePrositeGffOutputStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.prosite.PrositePatternsPostProcessingStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.prosite.PrositeProfilesPostProcessingStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.prosite.RunHmmPfsearchStep.class - [JAR]

├─ uk.ac.ebi.interpro.scan.management.model.implementations.prosite.RunPsScanStep.class - [JAR]

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