jar

uk.ac.ebi.mydas : mydas

Maven & Gradle

Aug 21, 2007
3 usages

mydas Distributed Annotation Server · This project aims to offer an easy-to-extend Java DAS server framework. It offers several advantages: * Implementing data sources is very easy but also flexible and powerful. * Data caching is built into the system, with access to the caching mechanism made available to the data sources. * All aspects of the server are highly configurable, including selecting options where the DAS 1.53 specification offers choices to the implementor. * The latest Java technologies have been used throughout the system to optimise performance and simplify data source development. * Wherever possible the same terminology is used in the API as in the DAS specification and XML - again, making data source development more easy. * The server allows XSLT transforms of the DAS XML to be configured to provide a simple DAS client view (limited to the single DAS source). More details of the DAS protocol, DAS servers and DAS clients can be found at http://www.biodas.org/wiki/Main_Page. The first version of this server is a complete implementation of Distributed Sequence Annotation System (DAS) Version 1.53. If you are interested in learning more about DAS 1.53, the specification is highly recommended as a concise and complete description of the DAS protocol that can be obtained from: http://biodas.org/documents/spec.html

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1.0.x

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uk.ac.ebi.mydas.controller

├─ uk.ac.ebi.mydas.controller.CacheManager.class - [JAR]

├─ uk.ac.ebi.mydas.controller.ConfigXmlUnmarshaller.class - [JAR]

├─ uk.ac.ebi.mydas.controller.DasFeatureRequestFilter.class - [JAR]

├─ uk.ac.ebi.mydas.controller.DataSourceConfiguration.class - [JAR]

├─ uk.ac.ebi.mydas.controller.DataSourceManager.class - [JAR]

├─ uk.ac.ebi.mydas.controller.EmptyCache.class - [JAR]

├─ uk.ac.ebi.mydas.controller.FoundFeaturesReporter.class - [JAR]

├─ uk.ac.ebi.mydas.controller.GlobalConfiguration.class - [JAR]

├─ uk.ac.ebi.mydas.controller.MydasServlet.class - [JAR]

├─ uk.ac.ebi.mydas.controller.SegmentQuery.class - [JAR]

├─ uk.ac.ebi.mydas.controller.SegmentReporter.class - [JAR]

├─ uk.ac.ebi.mydas.controller.SequenceReporter.class - [JAR]

├─ uk.ac.ebi.mydas.controller.ServerConfiguration.class - [JAR]

├─ uk.ac.ebi.mydas.controller.UnknownSegmentReporter.class - [JAR]

├─ uk.ac.ebi.mydas.controller.XDasStatus.class - [JAR]

uk.ac.ebi.mydas.model

├─ uk.ac.ebi.mydas.model.DasAnnotatedSegment.class - [JAR]

├─ uk.ac.ebi.mydas.model.DasComponentFeature.class - [JAR]

├─ uk.ac.ebi.mydas.model.DasEntryPoint.class - [JAR]

├─ uk.ac.ebi.mydas.model.DasEntryPointOrientation.class - [JAR]

├─ uk.ac.ebi.mydas.model.DasFeature.class - [JAR]

├─ uk.ac.ebi.mydas.model.DasFeatureOrientation.class - [JAR]

├─ uk.ac.ebi.mydas.model.DasGroup.class - [JAR]

├─ uk.ac.ebi.mydas.model.DasPhase.class - [JAR]

├─ uk.ac.ebi.mydas.model.DasRestrictedAnnotatedSegment.class - [JAR]

├─ uk.ac.ebi.mydas.model.DasRestrictedSequence.class - [JAR]

├─ uk.ac.ebi.mydas.model.DasSegment.class - [JAR]

├─ uk.ac.ebi.mydas.model.DasSequence.class - [JAR]

├─ uk.ac.ebi.mydas.model.DasTarget.class - [JAR]

├─ uk.ac.ebi.mydas.model.DasType.class - [JAR]

uk.ac.ebi.mydas.datasource

├─ uk.ac.ebi.mydas.datasource.AnnotationDataSource.class - [JAR]

├─ uk.ac.ebi.mydas.datasource.RangeHandlingAnnotationDataSource.class - [JAR]

├─ uk.ac.ebi.mydas.datasource.RangeHandlingReferenceDataSource.class - [JAR]

├─ uk.ac.ebi.mydas.datasource.ReferenceDataSource.class - [JAR]

uk.ac.ebi.mydas.exceptions

├─ uk.ac.ebi.mydas.exceptions.BadCommandArgumentsException.class - [JAR]

├─ uk.ac.ebi.mydas.exceptions.BadCommandException.class - [JAR]

├─ uk.ac.ebi.mydas.exceptions.BadDataSourceException.class - [JAR]

├─ uk.ac.ebi.mydas.exceptions.BadReferenceObjectException.class - [JAR]

├─ uk.ac.ebi.mydas.exceptions.BadStylesheetException.class - [JAR]

├─ uk.ac.ebi.mydas.exceptions.ConfigurationException.class - [JAR]

├─ uk.ac.ebi.mydas.exceptions.CoordinateErrorException.class - [JAR]

├─ uk.ac.ebi.mydas.exceptions.DataSourceException.class - [JAR]

├─ uk.ac.ebi.mydas.exceptions.UnimplementedFeatureException.class - [JAR]

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